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sanger-tol
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treeval
Pipelines for the production of Treeval data
https://pipelines.tol.sanger.ac.uk/treeval
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Adjust images again
#169
DLBPointon
closed
9 months ago
0
Generalise yaml values
#168
DLBPointon
closed
9 months ago
1
Dp24 better docs
#167
DLBPointon
closed
10 months ago
0
Incorrect use of bwa-mem2 in GENERATE_CRAM_CSV
#166
DLBPointon
closed
10 months ago
0
Update README.md
#165
DLBPointon
closed
10 months ago
1
Dp24 pretextgraph
#164
DLBPointon
closed
10 months ago
4
minimap2 align with increasing index size
#163
yumisims
closed
7 months ago
3
Release 1 Issue: So Many Errors
#162
DLBPointon
closed
10 months ago
0
Output k-mer spectra
#161
weaglesBio
closed
10 months ago
1
Add log2 of coverage for final output
#160
weaglesBio
closed
10 months ago
1
Repeat Density - add additional output file (markdup)
#159
weaglesBio
closed
10 months ago
1
Hi-C Mapping - Subset for juicer hi-c
#158
weaglesBio
closed
7 months ago
0
Longread Coverage - Convert last column to log2
#157
weaglesBio
closed
10 months ago
1
Testing Integration
#156
DLBPointon
closed
11 months ago
0
Release 2: Output kmer spectra plot image
#155
weaglesBio
closed
10 months ago
0
Release 1 Issues: .genome file naming
#154
DLBPointon
closed
10 months ago
1
Release 1 Issues: Pre.bed file is being output by mistake
#153
DLBPointon
closed
10 months ago
1
Refactoring of the test and test_github profiles
#152
muffato
closed
11 months ago
13
YAML validator
#151
DLBPointon
opened
11 months ago
1
The Big Merge
#150
DLBPointon
closed
11 months ago
5
Mm49 docs reformat
#149
DLBPointon
closed
11 months ago
1
Mm49 docs reformat
#148
DLBPointon
closed
11 months ago
1
Release 2: Add Pretext Graph
#147
DLBPointon
closed
10 months ago
2
Fix genome size
#146
yumisims
closed
11 months ago
3
Adding pretext ingestion docs
#145
DLBPointon
closed
11 months ago
7
REQUEST: Kill juicer jobs
#144
DLBPointon
closed
10 months ago
1
REQUEST: Container size into summary file
#143
DLBPointon
closed
9 months ago
0
Tower
#142
DLBPointon
closed
11 months ago
9
release 2 -- kmer based long read coverage
#141
yumisims
closed
8 months ago
3
Code suggestions
#140
muffato
closed
11 months ago
1
Release 2 - Coversion of input csv contamination into bed format
#139
DLBPointon
opened
11 months ago
1
REMINDER: Add tutorial documents and scripts
#138
DLBPointon
closed
11 months ago
2
Release 1 - GitHub Testing
#137
DLBPointon
closed
11 months ago
1
Information - Local Testing
#136
DLBPointon
opened
1 year ago
0
Release 2 - Set up GitHub issue layout for submissions
#135
DLBPointon
closed
7 months ago
1
Workflow report
#134
muffato
closed
1 year ago
4
Pre tag mm49
#133
muffato
closed
1 year ago
2
Pre tag
#132
DLBPointon
closed
11 months ago
15
sanger-tol logo
#131
muffato
closed
1 year ago
1
fixed findHalfcoverage
#130
yumisims
closed
1 year ago
2
TreeValProject redflag error
#129
DLBPointon
closed
11 months ago
1
Automatic Telomere ID and Comparison
#128
DLBPointon
opened
1 year ago
1
Better Stats Collection
#127
DLBPointon
closed
1 year ago
1
REQUEST - R2: HiCat
#126
DLBPointon
closed
7 months ago
2
Add process.tiny
#125
DLBPointon
closed
9 months ago
1
Fixes - Modules updated to latest
#124
DLBPointon
closed
1 year ago
8
Update modules
#123
DLBPointon
closed
1 year ago
3
Broken links in readme / documentation
#122
scorreard
closed
1 year ago
4
REVIEW: Fix GitHub CI yml
#121
priyanka-surana
closed
11 months ago
1
Fixes comma, image links and explainer
#120
DLBPointon
closed
1 year ago
1
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