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scipion-em
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scipion-em-imod
Plugin to use some of the Tomography tools from IMOD in Scipion
GNU General Public License v3.0
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Release 3.6.0
#300
JorMaister
closed
2 days ago
1
Using absolute links inside the tmp directory to fix SCIPION_SCRATCH issue
#299
oierlauzi
closed
2 days ago
3
add 3D ctf correction by IMOD
#298
azazellochg
opened
5 days ago
3
ImodHandler does not work properly
#297
azazellochg
opened
1 week ago
0
Symbolic links are broken when defining SCIPION_SCRATCH
#296
oierlauzi
closed
2 days ago
5
minor formatting
#295
azazellochg
closed
1 week ago
1
Jj add excluded views management
#294
JorMaister
closed
5 days ago
5
Jj bring az even odd
#293
JorMaister
closed
2 weeks ago
5
Jj add tests tcl
#292
JorMaister
closed
1 month ago
3
add a protocol for ctf handedness test
#291
azazellochg
opened
1 month ago
1
Update CHANGES.txt
#290
JorMaister
closed
2 months ago
1
refactor part 2
#289
azazellochg
closed
1 month ago
1
Expand the tests with the TCL
#288
JorMaister
closed
5 days ago
2
Modified etomo protocol to enhance usability of outputs downstream
#287
rdrighetto
closed
2 months ago
4
Expand the matching files criteria in the protocol import transformat…
#286
JorMaister
closed
2 months ago
0
check etomo output landmarks creation
#285
azazellochg
opened
3 months ago
0
why are IMOD_DIR IMOD_PATH cleared?
#284
truatpasteurdotfr
closed
3 months ago
1
Fixed bug that prevented etomo from opening when TS had excluded views created with Tomo viewer subset
#283
rdrighetto
closed
3 months ago
0
Gs refactor
#282
azazellochg
closed
2 months ago
6
check default values
#281
azazellochg
closed
2 months ago
0
3.5.1
#280
azazellochg
closed
3 months ago
0
condition on adjust densities
#279
Vilax
closed
3 months ago
0
- CTF correction: get rid of the decorator. Manage the failed TS in…
#278
JorMaister
closed
3 months ago
7
housekeeping
#277
azazellochg
closed
3 months ago
0
CTF correction step: generating defocus file failed
#276
wlugmayr
closed
3 months ago
4
Tilt-series preprocess odd/even problem with excluded views
#275
wlugmayr
closed
4 days ago
9
The excluded views are not taking into account byt protocols that work with TS
#274
Vilax
closed
4 days ago
1
3.5.0
#273
azazellochg
closed
3 months ago
3
Jj ctfcorr intersect with interp
#272
JorMaister
closed
3 months ago
1
protocol_tomoReconstruction.py should clean up unused files
#271
rdrighetto
opened
4 months ago
0
Fixed extensions in protocol_tomoReconstruction.py, only uses MRC_EXT now
#270
rdrighetto
closed
4 months ago
1
Fixes #268 by removing a mischievous comma
#269
rdrighetto
closed
4 months ago
0
ValueError: fname must be a string or file handle
#268
rdrighetto
closed
4 months ago
1
Protocol was looking for odd/even input stacks in extra, but they are in tmp
#267
rdrighetto
closed
4 months ago
0
Fixed CTF correction
#266
Vilax
closed
4 months ago
0
Added tapering by default and option for linear interpolation in apply transform protocol
#265
rdrighetto
closed
4 months ago
0
Import Transformation matrix should allow a pattern with the {TsId
#264
Vilax
closed
5 days ago
0
report/save alignment quality
#263
azazellochg
opened
5 months ago
0
save alignment from etomo protocol output
#262
azazellochg
closed
2 months ago
0
Jj adapt correct ctf to diff sizes
#261
JorMaister
closed
5 months ago
0
enhancing use and helps
#260
Vilax
closed
5 months ago
1
Fi fid ali fix
#259
fede-pe
closed
5 months ago
0
Jj add acq order 2 ctftomo
#258
JorMaister
closed
6 months ago
0
fix fiducial alignment: output LM generation
#257
fede-pe
closed
6 months ago
0
ImodViewer could be used to visualize any 2D/3D data (or at least MRC maps like subtomogram averages and templates generated from PDB)
#256
pconesa
opened
7 months ago
1
Review exlude views
#255
pconesa
closed
4 days ago
1
Release 3.3.0
#254
pconesa
closed
7 months ago
0
- Prevent viewers from locking the screen focus.
#253
pconesa
closed
7 months ago
0
bugfix for import ctf, set missing defocus flag
#252
azazellochg
closed
7 months ago
0
close #250
#251
azazellochg
closed
7 months ago
0
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