issues
search
scverse
/
scvi-tools
Deep probabilistic analysis of single-cell and spatial omics data
http://scvi-tools.org/
BSD 3-Clause "New" or "Revised" License
1.25k
stars
355
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
docs: automated update of tutorials
#3005
github-actions[bot]
closed
1 month ago
0
Backport PR #3003 on branch 1.2.x ([pre-commit.ci] pre-commit autoupdate)
#3004
meeseeksmachine
closed
1 month ago
1
[pre-commit.ci] pre-commit autoupdate
#3003
pre-commit-ci[bot]
closed
1 month ago
1
Backport PR #3000 on branch 1.2.x (Update pyproject.toml)
#3002
meeseeksmachine
closed
1 month ago
1
Backport PR #2999 on branch 1.2.x (Fix warning for DA function in MrVI)
#3001
meeseeksmachine
closed
1 month ago
1
Update pyproject.toml
#3000
ori-kron-wis
closed
1 month ago
1
Fix warning for DA function in MrVI
#2999
justjhong
closed
1 month ago
1
release: SCVI-Tools v1.2.0 Release
#2998
ori-kron-wis
closed
2 months ago
2
Backport PR #2996 on branch 1.2.x (docs: automated update of tutorials)
#2997
meeseeksmachine
closed
2 months ago
1
docs: automated update of tutorials
#2996
github-actions[bot]
closed
2 months ago
0
Backport PR #2991 on branch 1.2.x (release: updated v1.2.0 and RTD for py312)
#2995
meeseeksmachine
closed
2 months ago
1
docs: automated update of tutorials
#2994
github-actions[bot]
closed
2 months ago
0
[pre-commit.ci] pre-commit autoupdate
#2993
pre-commit-ci[bot]
closed
2 months ago
1
Device management
#2992
canergen
closed
2 months ago
5
release: updated v1.2.0 and RTD for py312
#2991
ori-kron-wis
closed
2 months ago
1
Backport PR #2989 on branch 1.2.x (Update pyproject.toml)
#2990
meeseeksmachine
closed
2 months ago
1
Update pyproject.toml
#2989
ori-kron-wis
closed
2 months ago
1
Backport PR #2987 on branch 1.2.x (test: update the resolution test workflow)
#2988
meeseeksmachine
closed
2 months ago
1
test: update the resolution test workflow
#2987
ori-kron-wis
closed
2 months ago
1
Backport PR #2960 on branch 1.2.x (docs: Counterfactual prediction user guide)
#2986
meeseeksmachine
closed
2 months ago
1
Update pyproject.toml
#2985
ori-kron-wis
closed
2 months ago
1
Backport PR #2982 on branch 1.2.x (test: Fix hugging face create repo test which was failing)
#2984
meeseeksmachine
closed
2 months ago
2
Update pyproject.toml
#2983
canergen
closed
2 months ago
1
test: Fix hugging face create repo test which was failing
#2982
ori-kron-wis
closed
2 months ago
1
total_vi.train() ValueError: Expected parameter loc (Tensor of shape (256, 20)) of distribution Normal(loc: torch.Size([256, 20]), scale: torch.Size([256, 20])) to satisfy the constraint Real()
#2981
raozuming
closed
2 months ago
9
Manual merge ruff and version fixes into 1.2
#2980
ori-kron-wis
closed
2 months ago
0
Manual merge ruff and version fixes into 1.2
#2979
ori-kron-wis
closed
2 months ago
1
Update Dockerfile
#2978
ori-kron-wis
closed
2 months ago
1
docs: automated update of tutorials
#2977
github-actions[bot]
closed
2 months ago
0
docs: automated update of tutorials
#2976
github-actions[bot]
closed
2 months ago
0
[pre-commit.ci] pre-commit autoupdate
#2975
pre-commit-ci[bot]
closed
2 months ago
1
update docker to py3.12
#2974
ori-kron-wis
closed
2 months ago
1
update ruff rules
#2973
ori-kron-wis
closed
2 months ago
1
Backport PR #2970 on branch 1.2.x (Drop Python 3.9)
#2972
meeseeksmachine
closed
2 months ago
1
Update pyproject.toml for 1.1.6
#2971
ori-kron-wis
closed
2 months ago
1
Drop Python 3.9
#2970
ori-kron-wis
closed
2 months ago
2
Update pyproject.toml
#2969
ori-kron-wis
closed
2 months ago
2
ValueError: "high is out of bounds for int32" when running setup_anndata on large AnnData object
#2968
Ron-bio
closed
2 months ago
10
change 1.1.6 release requirements
#2967
ori-kron-wis
closed
2 months ago
5
Drop python 3.9 and replace with python 3.12
#2966
ori-kron-wis
closed
2 months ago
0
potential issue with zinb / nb loss
#2965
jkobject
closed
2 months ago
3
Backport PR #2936 on branch 1.2.x (feat(train) Add support for categorial covariates in scArches)
#2964
meeseeksmachine
closed
2 months ago
1
I am getting ZeroDivisionError, any solution in solving this?
#2963
yojetsharma
closed
2 months ago
4
Backport PR #2961 on branch 1.2.x (Remove dependency anndata 0.10.8)
#2962
meeseeksmachine
closed
2 months ago
1
Remove dependency anndata 0.10.8
#2961
canergen
closed
2 months ago
1
docs: Counterfactual prediction user guide
#2960
justjhong
closed
2 months ago
4
docs: fix progress bar interactive style in RTD
#2959
ori-kron-wis
closed
2 months ago
2
Fix the progress bar during training models trough tout the tutorials
#2958
ori-kron-wis
closed
2 months ago
0
[pre-commit.ci] pre-commit autoupdate
#2957
pre-commit-ci[bot]
closed
2 months ago
1
Update to ruff rules. Changed code to pass these tests
#2956
canergen
closed
2 months ago
2
Previous
Next