seppinho nft-vcf issues - Githubissues

seppinho / nft-vcf

nf-test plugin to provide support for VCF files.

MIT License

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issues

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Plugin not working well with BCF.GZ files

#11 LouisLeNezet opened 2 days ago
0
Create index only if it not exists

#10 seppinho closed 1 month ago
0
java.io.IOException: Index 9 out of bounds for length 8 - suggestion for clearer error message

#9 ToonRosseel opened 1 month ago
3
File clash if tbi index already exists

#8 crichgriffin opened 1 month ago
1
`.phased` not correct for VCFs containing phased & unphased genotypes.

#7 rollf opened 1 month ago
1
Uncompressed VCF variants

#6 fellen31 opened 2 months ago
3
Differences in `phasedAutodetect` based on different Nextflow versions

#5 atrigila opened 2 months ago
1
VCF with multiple chromosomes

#4 LouisLeNezet closed 4 months ago
4
Downgrade htsjdk to support Java 11

#3 seppinho closed 4 months ago
0
Update README.md

#2 lukfor closed 5 months ago
0
[Feature Request] Documentation

#1 kenibrewer closed 4 months ago
3