seung-lab cloud-volume issues

seung-lab / cloud-volume

Read and write Neuroglancer datasets programmatically.

https://twitter.com/thundercloudvol

BSD 3-Clause "New" or "Revised" License

131 stars 47 forks source link

issues

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Skeleton typo

#639 zyx287 closed 1 week ago
1
Add `segment_prop_dir` and `segment_properties` arguments for the precomputed format

#638 chourroutm opened 1 week ago
2
Allow passing of `segment_properties` argument to `CloudVolumePrecomputed.create_new_info`

#637 chourroutm opened 1 week ago
0
urllib3 version 2 incompatibility

#636 ceesem opened 1 week ago
3
No data written to local folder on Windows 11

#635 chourroutm opened 2 weeks ago
3
Error trying to load local zarr dataset

#634 dstansby opened 2 weeks ago
6
Wms jpegxl params

#633 william-silversmith closed 2 weeks ago
0
ValueError: cannot reshape array of size 4028826 into shape (512,512,16,1)

#632 bang2003er opened 3 weeks ago
1
Numpy warnings

#631 schlegelp closed 3 weeks ago
1
fix: prevent race condition on LRU lock

#630 william-silversmith closed 4 weeks ago
0
Rare race condition with LRU Cache

#629 dodamih closed 4 weeks ago
1
feat: allow pointing directly at mesh and skeleton paths

#628 william-silversmith opened 2 months ago
0
simple_merge on empty Skeletons fails

#627 jasonkena closed 2 months ago
2
TypeError when writing zarr file

#626 Magic-Ludo opened 2 months ago
2
feat: view function that can visualize images, seg, meshes, skeletons

#625 william-silversmith opened 2 months ago
0
Fixes for lib.save_image

#624 macrintr closed 2 months ago
3
Fix Callable type annotation

#623 JEElsner closed 2 months ago
1
Python versions <3.9 are unsupported

#622 JEElsner closed 2 months ago
0
`TypeError` in `download` method of `cloudvolume` when `mip` is `None`

#621 torms3 closed 2 months ago
1
`vol.mesh.exists('4650')` tells me meshes 4, 6, 5, and 0 don't exist :thinking:

#620 jasper-tms closed 2 months ago
2
feat: Add "unit" to Bbox + accept physical Bbox in CV image functions

#619 william-silversmith closed 3 months ago
0
Converting EM Data from N5 to Precomputed Format

#618 bang2003er closed 2 months ago
22
feat: read and write zarr

#617 william-silversmith closed 3 months ago
0
Fix Bbox docstring, add example

#616 rmorey closed 3 months ago
0
BREAKING: feat: add support for jpegxl image compression + make some codecs optional

#615 william-silversmith closed 2 months ago
0
feat: add skeleton sharded uploads

#614 william-silversmith closed 3 months ago
0
Creating a precomputed cloudvolume from an HDF5 file

#613 Magic-Ludo opened 4 months ago
1
np.float deprecation

#612 fcollman closed 4 months ago
1
Graphene: how to view agglomerated supervoxels

#611 jakobtroidl closed 5 months ago
2
"graphene://middleauth+https://" protocol in a cloudpath does not work

#610 ceesem closed 2 months ago
7
feat: shard->shard transfers, memory cutout, transcoding images

#609 william-silversmith closed 6 months ago
0
Installing cloudvolume from an environment fails because of greenlet

#608 jboulanger91 closed 7 months ago
2
Installing on mac M1 - fastremap

#607 neurologic opened 7 months ago
2
Incompatible with python 3.12

#606 clbarnes closed 4 months ago
11
How to void the cloudvolume.exceptions.EmptyVolumeException

#605 liuyx599 closed 9 months ago
0
Load BossDB S3 URI Error

#604 JackieZhai closed 9 months ago
3
Bugfix: fixes skeleton viewer

#603 jasonkena closed 10 months ago
3
is there a way to remove parts of a mesh where the skeleton is not fully connected

#602 copypasteearth opened 11 months ago
2
Is there a way to get points from a segmentation

#601 copypasteearth closed 11 months ago
2
bug in saving precomputed meshes: unexpected keyword argument 'fuse'

#600 jefferis closed 3 months ago
3
Using frangi filter SimpleItk results in empty segmentation

#599 copypasteearth closed 11 months ago
2
perf: accelerate raw encoding speed for f order images w/o compression

#598 william-silversmith closed 1 year ago
0
Is there a way to rotate a volume on the XZ axis?

#597 copypasteearth opened 1 year ago
1
How to get the segments and segment query from volumes for mesh?

#596 copypasteearth closed 1 year ago
1
Numpy incompatibility across required packages on python 3.10/OS X

#595 ceesem opened 1 year ago
2
Downloading H01's 4nm_raw Retrieves Only Zeros, Despite Non-Zero Contents in NG

#594 Lauenburg closed 1 year ago
11
feat+refactor: add shard filename function for images

#593 william-silversmith closed 1 year ago
0
feat: add cache multi-processing locking feature

#592 william-silversmith closed 1 year ago
0
Cloud volume that is made on linux machine does not open in neuroglancer in safari

#591 copypasteearth closed 3 months ago
13
Problem with Downloading Graphene Meshes

#590 william-silversmith closed 1 year ago
2