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seung-lab
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connected-components-3d
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)
GNU Lesser General Public License v3.0
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Supporting V1 dtype
#126
SergeyTsimfer
opened
1 week ago
4
Support for Numpy 2.0
#125
lorinczszabolcs
closed
1 month ago
3
Applying dust to labels does not do anything
#124
Mohinta2892
closed
11 hours ago
4
feat: voxel connectivity graph to labeled image
#123
william-silversmith
closed
2 months ago
0
Any way to make this GPU Compatible?
#122
aymuos15
closed
2 weeks ago
6
Add a better error for type support.
#121
aymuos15
closed
2 months ago
4
feat: periodic boundary
#119
william-silversmith
closed
3 months ago
0
Is the output label of largest_k ordered?
#118
hhuang91
closed
3 months ago
2
Periodic Boundary Conditions
#117
william-silversmith
closed
3 months ago
4
Question on the output of contacts
#116
tengssh
closed
3 months ago
9
Statistics output
#114
ckolluru
closed
7 months ago
7
About the lastest_k function
#113
seisen0305
closed
11 months ago
4
largest_k fails for transposed arrays
#112
TheRealBazhen
closed
11 months ago
6
cc3d.statistics["bounding_boxes"] are wrong
#110
nr2cr24
closed
1 year ago
1
Does cc3d also work with memmory-mapped numpy arrays and array-like data?
#109
Karol-G
closed
1 year ago
14
Additional metrics support
#108
drusmanbashir
closed
6 months ago
2
Question on comparing individual lesions between two masks based on the cc3d.statistics output.
#106
PanosProv
opened
1 year ago
1
Cannot find reference 'dust' in 'cc3d.py'
#105
maxrohleder
closed
1 year ago
2
Delayed numpy import during setup
#104
maxme1
closed
1 year ago
2
1D Array of 4 Elements Incorrect
#103
modaresimr
closed
1 year ago
5
Massive memory Leak
#102
modaresimr
closed
1 year ago
7
dust sugnature
#101
doiko
closed
1 year ago
1
Applying Dust and largest_k dtype output option
#100
doiko
opened
1 year ago
2
cc3d.dust fails
#99
doiko
closed
1 year ago
3
Build Equivalence Table Two Z Slices at a Time
#98
william-silversmith
opened
1 year ago
0
fix: ensure contacts can be called with 2d image
#96
william-silversmith
closed
1 year ago
0
voxel_connectivity_graph and contacts can not be applied in 2D label
#95
1999kevin
closed
1 year ago
5
feat: cc3d.contacts (region_graph + surface area or contact count)
#93
william-silversmith
closed
2 years ago
0
fix: ensure slice.stop is integer
#91
william-silversmith
closed
2 years ago
0
cc3d.statistics['bounding_boxes'] is contains floats instead of int as slice positions
#90
drusmanbashir
closed
2 years ago
2
feat: bring back out_dtype
#89
william-silversmith
closed
2 years ago
0
feat: largest_k function
#86
william-silversmith
closed
2 years ago
0
perf: faster special cases for dust
#85
william-silversmith
closed
2 years ago
0
feat: dust removal
#84
william-silversmith
closed
2 years ago
0
Add Remove Dust Function
#83
william-silversmith
closed
2 years ago
2
perf: faster continuous CCL for signed types
#82
william-silversmith
closed
2 years ago
1
perf: improve speed of 26, 4, and 8 connected continuous labeling
#81
william-silversmith
closed
2 years ago
1
feat: Continuous value CCL for direct application to microscopy images
#80
william-silversmith
closed
2 years ago
0
Add Linux aarch64 Wheel Built Support
#78
odidev
closed
2 years ago
2
Add support to release linux aarch64 wheels
#77
odidev
closed
2 years ago
2
feat: adds statistics function
#76
william-silversmith
closed
2 years ago
0
Label Statistics
#75
william-silversmith
closed
2 years ago
7
IndexError is generated when using cc3d.connected_components
#74
julesberman
closed
2 years ago
4
feat: parallel
#73
william-silversmith
opened
2 years ago
2
What is process?
#72
RylanSchaeffer
closed
10 months ago
6
fix: single rows of pixels were not handled for C order arrays
#71
william-silversmith
closed
3 years ago
0
connected_components does not labels single pixels in 2D
#70
blchatel
closed
3 years ago
4
warning from numpy
#69
jingpengw
closed
3 years ago
2
chore: see if we can build on MacOS
#68
william-silversmith
closed
2 years ago
0
perf: improve performance for very sparse images
#67
william-silversmith
closed
3 years ago
3
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