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simonlabcode
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bam2bakR
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Separate environment for table merging in R
#25
isaacvock
closed
1 month ago
0
Proper use of setDT
#24
isaacvock
closed
1 month ago
0
Need to convert to data.table if necessary
#23
isaacvock
closed
1 month ago
0
Wrong delimiter specified for featureCounts CORE files
#22
isaacvock
closed
1 month ago
0
Missed one fread case
#21
isaacvock
closed
1 month ago
0
Catch and handle weird r-utils edge case
#20
isaacvock
closed
1 month ago
0
Update config to better support featureCounts parameter tuning
#19
isaacvock
closed
2 months ago
0
Isoform stability workflow?
#18
aleighbrown
closed
1 month ago
4
Strandness data speficification for --directional-mapping-reverse option on HISAT3N
#17
paulinarosales
closed
3 months ago
5
Fix sample ID idiosyncratic behavior
#16
isaacvock
closed
4 months ago
1
Output changes if different sample IDs are assigned
#15
ryuma-matsubara
closed
4 months ago
4
Allow users to specify which features to assign reads to
#14
isaacvock
closed
4 months ago
0
Fix and test normalization with spike-in
#13
isaacvock
closed
4 months ago
0
Error during normalize when using spike-in
#12
christianpoitras
closed
4 months ago
2
Error in rule cnt_muts: jobid: 17
#11
AlessandroPilli
closed
4 months ago
7
MissingOutputException in rule maketdf (some output files are missing)
#10
ryuma-matsubara
closed
6 months ago
3
bam2bakR version 3.0.0
#9
isaacvock
closed
8 months ago
0
issue of f-string in snakemake and python 3.12 makes extra whitespaces in get_input_fastqs
#8
realzhang
closed
8 months ago
2
How to re-run snakemake without repeating jobs?
#7
HannahDixon
closed
1 year ago
2
How to handle pro-seq Timelapse data?
#6
WangJingwen21
closed
1 year ago
2
Error in rule normalize : jobid 17
#5
HannahDixon
closed
1 year ago
3
Error while run: snakedeploy deploy-workflow https://github.com/simonlabcode/bam2bakR.git . --branch main
#4
WangJingwen21
closed
1 year ago
13
Issue during htseq_cnt job: [E::sam_parse1] hex field does not have an even number of digits
#3
boehmv
closed
1 year ago
6
Updated handling of cores
#2
isaacvock
closed
1 year ago
0
Cleaning up bam2bakR
#1
isaacvock
closed
1 year ago
0