slash-segmentation CHM issues

slash-segmentation / CHM

Cascaded Hierarchical Model Automatic Segmentation Algorithm

BSD 2-Clause "Simplified" License

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Modified singularity image definition file to use specific version of rpy2

#31 coleslaw481 closed 7 years ago
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global variable 'method' not found when running chm train

#30 coleslaw481 closed 7 years ago
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pychm fails with permission denied error when /tmp/pychm-pyfftw-wisdom created by another user

#29 coleslaw481 closed 7 years ago
2
Split environ[name]=str(nthreads) into two lines cause python 2.7 was…

#28 coleslaw481 closed 7 years ago
1
Chrisdev

#27 coleslaw481 closed 7 years ago
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Update pychm_singuarity build to add MKL library

#26 coleslaw481 opened 7 years ago
6
Try out smaller patch size for CHM tomography

#25 coleslaw481 opened 7 years ago
2
Chrisdev

#24 coleslaw481 closed 8 years ago
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Added functional tests to release system and added version injection into CHM train and test scripts

#23 coleslaw481 closed 10 years ago
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Added bats test for GetInputFiles.m which is failing cause GetInputFiles.m does not work with tif

#22 coleslaw481 closed 10 years ago
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commented out stty sane line cause it was screwing up bamboo

#21 coleslaw481 closed 10 years ago
2
had to allow more error when comparing probability maps due to recent ch...

#20 coleslaw481 closed 10 years ago
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modified CHM system test to allow more error when comparing probability maps

#19 coleslaw481 closed 10 years ago
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renamed a bats test file and updated CHM_test.sh.bats to handle changes in what program CHM_test.sh calls

#18 coleslaw481 closed 10 years ago
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added -fuzz 7% to handle variance in output when running CHM_train and t...

#17 coleslaw481 closed 10 years ago
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Get compiling on Bamboo

#16 coderforlife opened 10 years ago
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Combine algorithm/CHM_test.sh and wrappers/compiled/CHM_test.sh and CHM_train.sh's

#15 coderforlife opened 10 years ago
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Added ParseArgument.m.bats test and some tests for compiled CHM

#14 coleslaw481 closed 10 years ago
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Added tests for wrappers/compiled and updated tests to work with new -h flag

#13 coleslaw481 closed 10 years ago
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Changes to panfish chm wrappers to support running chm train

#12 coleslaw481 closed 10 years ago
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Added scripts to run CHM Train via panfish

#11 coleslaw481 closed 10 years ago
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Updates to panfish wrapper scripts

#10 coleslaw481 closed 10 years ago
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Small modifications to support compiled CHM

#9 coleslaw481 closed 10 years ago
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Changes to panfish wrappers

#8 coleslaw481 closed 10 years ago
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Semi complete switch of Panfish code to utilize tiles feature of CHM to run jobs

#7 coleslaw481 closed 10 years ago
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Added more unit and system tests

#6 coleslaw481 closed 10 years ago
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Additional unit tests and a couple system tests

#5 coleslaw481 closed 10 years ago
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Added BATS unit testing framework and made minor changes to CHM_test.sh

#4 coleslaw481 closed 10 years ago
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Application now writes stdout/err for each runCHM.sh job

#3 coleslaw481 closed 10 years ago
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Changes in panfish CHM wrapper scripts

#2 coleslaw481 closed 10 years ago
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added a timer to run_from_shell.m

#1 coleslaw481 closed 10 years ago
0