smangul1 MiCoP issues - Githubissues

smangul1 / MiCoP

MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.

GNU General Public License v3.0

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issues

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abundances.txt file is always empty

#13 jakalssj3 opened 2 months ago
0
should I add "--paired" for paired end reads?

#12 WooJenny27 opened 1 year ago
0
How to update the database

#11 wfgui opened 2 years ago
4
Indices.zip impossible to download during setup

#10 Leob44 closed 2 years ago
4
No fungal hits found using fungal input. Better reporting output needed ?

#9 colindaven closed 3 years ago
2
Add --threads

#8 colindaven opened 4 years ago
0
Raw read counts

#7 mradz19 closed 4 years ago
1
Possible to use more cores?

#6 SimenHyllHansen closed 5 years ago
1
Failing to open file when using --paired

#5 SimenHyllHansen closed 5 years ago
2
compute-abundances error

#4 bouquetj closed 5 years ago
4
Unable to setup MiCoP

#3 thierroll opened 5 years ago
9
Fungal / viral database

#2 theo-allnutt-bioinformatics closed 5 years ago
1
Pre-filtering?

#1 dkoslicki closed 6 years ago
1