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snakemake-workflows
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transcriptome-differential-expression
long read differential expression analysis
Mozilla Public License 2.0
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feat: read length filter
#44
yeising
opened
21 hours ago
0
chore(main): release 1.1.0
#43
github-actions[bot]
opened
1 day ago
0
fix: env update
#42
cmeesters
closed
1 day ago
0
chore(main): release 1.1.0
#41
github-actions[bot]
closed
3 days ago
0
chore(main): release 1.1.0
#40
github-actions[bot]
closed
3 days ago
0
fix: added new samples to config
#39
yeising
closed
3 days ago
0
feat: map qc
#38
yeising
closed
3 days ago
0
chore(main): release 1.1.0
#37
github-actions[bot]
closed
1 week ago
0
fix: added import sys for log
#36
yeising
closed
1 week ago
0
add wrapper for gffreader rule
#35
cmeesters
opened
1 week ago
0
implement optional iRODS archiving rule per module
#34
cmeesters
opened
1 week ago
0
implement splicing detection
#33
cmeesters
opened
1 week ago
0
fix: deseq2 script
#32
cmeesters
opened
1 week ago
0
add report rst files
#31
cmeesters
opened
1 week ago
0
consolidate wanted output file
#30
cmeesters
opened
1 week ago
0
add wrapper and rule for qualimap
#29
cmeesters
opened
1 week ago
0
add samtools wrapper for stats
#28
cmeesters
opened
1 week ago
0
add samtools wrapper for sort
#27
cmeesters
opened
1 week ago
0
add samtools wrapper for view
#26
cmeesters
opened
1 week ago
0
create wrapper for salmon usage
#25
cmeesters
opened
1 week ago
0
add rule for qualimap
#24
cmeesters
opened
1 week ago
0
chore(main): release 1.1.0
#23
github-actions[bot]
closed
1 week ago
0
fix: read quantification
#22
yeising
closed
1 week ago
0
chore(main): release 1.1.0
#21
github-actions[bot]
closed
3 weeks ago
0
chore(main): release 1.0.1
#20
github-actions[bot]
closed
1 month ago
0
fix: lookup #18
#19
cmeesters
closed
1 month ago
1
fix: lookup in write_coldata
#18
cmeesters
closed
1 week ago
0
chore(main): release 1.0.0
#17
github-actions[bot]
closed
2 months ago
1
feat: qc rules
#16
yeising
closed
3 weeks ago
0
Feat ci pipeline
#15
yeising
closed
2 months ago
0
Feat logfiles
#14
yeising
closed
2 months ago
0
CI_pipeline
#13
yeising
closed
2 months ago
0
Ci pipeline
#12
yeising
closed
3 months ago
0
Fix/conda lookup
#11
cmeesters
closed
3 months ago
0
use wrapper for minimap2
#10
cmeesters
opened
3 months ago
0
Implement histogram plotting for DE-Analysis
#9
cmeesters
opened
3 months ago
0
add QC step
#8
cmeesters
closed
1 week ago
1
add tempfile directives on all but the plot and stats generating rules
#7
cmeesters
opened
3 months ago
0
update cluster parameterization account to benchmarking results
#6
cmeesters
opened
3 months ago
0
add CI pipline
#5
cmeesters
opened
3 months ago
2
update README
#4
cmeesters
opened
3 months ago
0
typo in the repo-name
#3
dlaehnemann
closed
3 months ago
2
generate benchmarking data for MogonII
#2
cmeesters
opened
3 months ago
1
add meaningful log parameterization to ALL rules
#1
cmeesters
closed
1 week ago
1