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sneumann
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xcms
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
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Query about writeMSData
#524
BaylorSci
closed
3 years ago
4
.centWave_orig - unexpected code
#523
RonzoniInstitute
closed
3 years ago
1
.centWave_orig - unexpected code
#522
RonzoniInstitute
opened
3 years ago
3
Alignment of experiment containing BLANKS AND QC
#521
Adafede
closed
1 year ago
10
fillPeaks.MSW-methods
#520
yuan596
closed
3 years ago
3
Fillpeaks - Error in binYonX
#519
lecorguille
opened
3 years ago
1
group—mzclust
#518
yuan596
opened
3 years ago
5
FindchromPeaks issue
#517
BaylorSci
closed
3 years ago
1
Re-add old deprecated parallel processing functionality
#516
jorainer
closed
3 years ago
0
Extract MS2 from a few samples and maintain alignment and feature assignment
#515
ghost
closed
3 years ago
5
Peak Inflection Points for Feature Peak Area Integration
#514
shen420
opened
3 years ago
3
xcms version 3.3.1
#513
michael-vermeulen
closed
3 years ago
3
troubles with groupChromPeaks on CentWave MS2 peak detection & creating diffreport once everything ok
#512
CLechaplais
closed
3 years ago
4
Chromatograms in row 1 have different mz
#511
antonwnk
opened
4 years ago
5
Small updates and example performance improvements
#510
jorainer
closed
4 years ago
0
issue # 479
#509
MetabolomicsSA
closed
4 years ago
1
Error in .local(object, ...) : xcmsSource: file not found: NA
#508
wanglai786
opened
4 years ago
2
When I use xcms,I met error about mzR
#507
nyj123
closed
4 years ago
3
xcms adjustRtime OrbiwarpParam on Rapid Polarity Switch Data
#506
grangel0955
opened
4 years ago
1
Issue using readMgfData function
#505
Salonigupta3
closed
4 years ago
4
Filter chrom peaks by intensity
#504
jorainer
closed
4 years ago
0
Error in object@backend$getPeakList(scans) : Invalid cvParam accession "1003007"
#503
lingjuewang
opened
4 years ago
1
get only the peaks that meet the "prefilter" criterion
#502
mar-garcia
closed
4 years ago
4
Error: package ‘MSnbase’ 2.15.0 was found, but >= 2.15.3 is required by ‘xcms’
#501
Mewozzz
closed
3 years ago
5
Warning message: Not a validObject(): no slot of name "extendLengthMSW" for this object of class "CentWaveParam"
#500
jmorim
closed
4 years ago
2
Job warnings in findChromPeaks()
#499
tsufz
opened
4 years ago
1
plot functions error: "Error in (function (cl, name, valueClass) : ... not a slot in class "list""
#498
jmorim
closed
4 years ago
6
fillChromPeaks fails processing data
#497
ZandkarimiF
closed
4 years ago
3
Add the `estimatePrecursorIntensity` function
#496
jorainer
closed
4 years ago
0
Update/fix NAMESPACE to import MSpectra and MChromatograms
#495
jorainer
closed
4 years ago
0
Adapt to MSnbase 2.15.3
#494
jorainer
closed
4 years ago
1
Windows x64 (64-bit) error in MergeNeighboringPeaksParam
#493
sneumann
opened
4 years ago
1
Processing thousands of file with XCMS crash
#492
adelabriere
opened
4 years ago
6
Change to MSpectra and MChromatograms classes from MSnbase
#491
jorainer
closed
4 years ago
1
Some additional fixes to reconstructChromPeakSpectra
#490
jorainer
closed
4 years ago
0
fix: report rtime for SWATH reconstructed spectra
#489
jorainer
closed
4 years ago
0
New peak filling method
#488
jorainer
closed
4 years ago
0
Chromatogram objects with sample subset selection
#487
Tony-II
closed
4 years ago
3
xcms::xcmsSet broken on Bioc Devel (3.12) branch, "invalid class “xcmsFileSource” object: superclass "characterORconnection" "
#486
andzajan
closed
4 years ago
1
SWATH: reconstructChromPeakSpectra: rtime is always NA
#485
RiyaDhar
closed
4 years ago
11
Performance improvements and new functionality
#484
jorainer
closed
4 years ago
0
How to set polarity for netCDF data?
#483
ZandkarimiF
closed
4 years ago
2
Error after converting XCMSnEXP to xcmsSet
#482
MetabolomicsSA
closed
4 years ago
3
std::bad_array_length while running Obiwarp
#481
Michaelncallahan
opened
4 years ago
21
Several updates, fixes etc
#480
jorainer
closed
4 years ago
1
issue with plot Chromatograms object, xcms 3.9.1
#479
MetabolomicsSA
closed
3 years ago
10
PR to resolve issue #464 by fixing group matrix type
#478
wkumler
closed
4 years ago
0
Write multiple files to mzML
#477
BaylorSci
closed
3 years ago
5
Bug fix: groupval() failing on object converted from XCMSnExp. Issue 471
#476
andzajan
closed
4 years ago
7
fillChromPeaks Throwing Exception
#475
sjgreig27
closed
4 years ago
7
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