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som-shahlab
/
ehr_ml
Code for doing machine learning with various EHRs
MIT License
21
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3
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Update setup.rst
#34
guolin1
closed
1 year ago
0
specify cuda and torch versions to be compatible with Nero
#33
guolin1
closed
1 year ago
0
Bump joblib from 1.1.0 to 1.2.0
#32
dependabot[bot]
closed
1 year ago
0
Bump numpy from 1.21.0 to 1.22.0
#31
dependabot[bot]
closed
2 years ago
0
Bump numpy from 1.20.0 to 1.21.0
#30
dependabot[bot]
closed
2 years ago
1
Patient ID not found in timeline
#29
bechlerk
closed
2 years ago
1
Allow users to specify train/val split using patient_id and date
#28
guolin1
closed
2 years ago
1
Observing Poor Performance on Our Independent Models
#27
chethanjjj
closed
2 years ago
6
Siyun/string description
#26
Siyun96
closed
2 years ago
0
[FIX] bug when using --exclude_patient_ratio
#25
marshuang80
closed
2 years ago
1
Fetch description string for each terminology/code token
#24
jason-fries
opened
2 years ago
0
Fix EHR ML documentation bugs
#23
jason-fries
opened
2 years ago
0
New option for convert_patient_data
#22
marcelc21399
opened
3 years ago
0
Improve holdout/exclusion
#21
EthanSteinberg
closed
1 year ago
0
explicit trainer API + added extra description, defaults to cmd line …
#20
woffett
closed
3 years ago
0
Rename `StrideDataset` to something more generic
#19
jason-fries
closed
3 years ago
1
Add .readthedocs.yml hook for auto doc build
#18
jason-fries
closed
3 years ago
1
Jlli/refactor
#17
woffett
closed
3 years ago
1
Update help menus, fix typos (in documentation and variable names), add more explanation of day offsets
#16
alisoncallahan
opened
3 years ago
1
More example usage of the many labeling helper functions
#15
birjuspatel
opened
3 years ago
0
Documenting data splitting procedures and best practices
#14
spfohl
opened
3 years ago
0
Nit: Looks like we use an LSTM instead of a GRU?
#13
woffett
closed
3 years ago
2
CLMBR notebook API clarity
#12
guolin1
closed
2 years ago
2
Minor hiccup during installation
#11
guolin1
closed
3 years ago
1
Streamline featurize and add a BaseModelOutput type class
#10
jason-fries
opened
3 years ago
0
Add requirements.txt to install instructions
#9
jason-fries
closed
3 years ago
2
Create a more standard training loop interface for pretraining
#8
jason-fries
opened
3 years ago
1
Move the training loop boilerplate code
#7
jason-fries
opened
3 years ago
1
add util to convert from original PIDs, date strings to ehr_ml PIDs, …
#6
woffett
closed
3 years ago
1
Switch to a continuous time representation
#5
EthanSteinberg
closed
1 year ago
2
separate featurize_patients into non-label and label version
#4
woffett
closed
3 years ago
0
Jlli/subset extract
#3
woffett
closed
3 years ago
0
Create a Singulary container build of CLMBR
#2
jason-fries
opened
3 years ago
3
Unable to install ehr_ml
#1
guolin1
closed
3 years ago
4