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steno-aarhus
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osdc
Open-Source Diabetes Classifier: an R package to classify diabetes status in Danish registers
https://steno-aarhus.github.io/osdc/
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docs: Required variables in design docs
#56
lwjohnst86
closed
8 months ago
1
Remove irrelevant code from `dev/` files
#55
lwjohnst86
closed
8 months ago
0
Tests that assess compatibility with various input sources
#54
lwjohnst86
opened
8 months ago
0
docs: drafting first section of getting started vignette
#53
lwjohnst86
closed
8 months ago
0
Include list of required variables in design vignette
#52
lwjohnst86
closed
8 months ago
0
docs: Textual description of algorithm
#51
lwjohnst86
closed
8 months ago
0
Function to create CONSORT-style flow diagram like in Ander's thesis
#50
lwjohnst86
opened
8 months ago
0
Build/add recommended vscode extensions
#49
signekb
closed
8 months ago
0
feat: include variable description as exported dataset as well as a function to get the required variables
#48
lwjohnst86
closed
8 months ago
0
Function to internally convert variables to lowercases
#47
lwjohnst86
closed
8 months ago
0
chore: General cleanup
#46
lwjohnst86
closed
8 months ago
0
feat: verify required variables in dataset
#45
lwjohnst86
closed
8 months ago
0
Discussion: Should we use the same capitalization as the registers use or force lowercase for everything?
#44
lwjohnst86
closed
8 months ago
1
docs: add use cases and core functionality of package
#43
lwjohnst86
closed
8 months ago
0
docs: first draft of design principles.
#42
lwjohnst86
closed
8 months ago
0
docs: small edits to the README file.
#41
lwjohnst86
closed
8 months ago
2
chore: Move code into dev folder to clean up R folder
#40
lwjohnst86
closed
8 months ago
0
feat: :sparkles: workflow that assigns PR author as assignee
#39
signekb
closed
9 months ago
0
Create auto-assign PR action
#38
lwjohnst86
closed
9 months ago
0
csv file of data sources and variables used by the algorithm
#37
Aastedet
closed
8 months ago
0
Create section in design doc on principles followed
#36
lwjohnst86
closed
8 months ago
0
Separate function or data that describes the logic of the algorithm
#35
lwjohnst86
closed
5 months ago
2
Internal function to validate variable name in dataset with official DST variable names
#34
lwjohnst86
opened
9 months ago
0
Function to validate input variable list with expected variables from register
#33
lwjohnst86
closed
8 months ago
0
Create variable list as dataset in data-raw folder
#32
lwjohnst86
closed
8 months ago
1
build: Setup basic package infrastructure and files
#31
lwjohnst86
closed
8 months ago
0
build: add lifecycle
#30
signekb
closed
9 months ago
0
CI: add test coverages actions and pull request helpers
#29
Aastedet
closed
9 months ago
0
Create function that makes a Markdown table of all registers and variables needed by this package
#28
lwjohnst86
opened
9 months ago
2
Create section in a design doc on core functionality and use cases
#27
lwjohnst86
closed
8 months ago
0
Create simple flow diagram for the general functionality
#26
lwjohnst86
closed
5 months ago
1
Create unit test data (internal only), not for use in examples
#25
lwjohnst86
closed
9 months ago
1
Create example (fake) dataset to use in examples/documentation
#24
lwjohnst86
closed
7 months ago
1
Investigate how to use VSCode for R package development
#23
lwjohnst86
opened
9 months ago
1
Idea: Add `steno-aarhus` to r-universe?
#22
lwjohnst86
opened
9 months ago
0
Docs: Move code into vignette file
#21
lwjohnst86
closed
11 months ago
0
Protect main branch
#20
signekb
closed
11 months ago
1
Feat/test data for lab and health insurance
#19
signekb
closed
7 months ago
9
Feat/lab-test-data: Create test lab_df and health_insurance_df
#18
signekb
closed
11 months ago
1
ci: Add files that tell GitHub to run checks on the package
#17
lwjohnst86
closed
10 months ago
3
Function to list all registers needed as well as all variables needed
#16
lwjohnst86
closed
8 months ago
1
Docs: Add explanations on what OSDC is in the README
#15
lwjohnst86
closed
12 months ago
0
config: Small settings for working in the project on a package
#14
lwjohnst86
closed
12 months ago
0
Create function: extract_prevalent_diabetes()
#13
Aastedet
closed
6 months ago
1
Create function: create_diabetes_cohort()
#12
Aastedet
closed
6 months ago
1
Create helper function: censor_pcos()
#11
Aastedet
closed
6 months ago
1
Create helper function: censor_gdm()
#10
Aastedet
closed
6 months ago
1
Create function: filter_services()
#9
Aastedet
closed
6 months ago
1
Create function: filter_hba1c()
#8
Aastedet
closed
6 months ago
1
Create function: filter_meds()
#7
Aastedet
closed
6 months ago
1
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