issues
search
stjude
/
punctatools
Detection, colocalization, and quantification of spots / puncta
Other
8
stars
7
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
KeyError: 'extra_metadata' when running 'setup_puncta_analysis.jpynb'
#37
ginger830617
opened
3 months ago
0
KeyError: 'extra_metadata' when running example "setup_images_to_stack.ipynb"
#36
byee4
opened
5 months ago
1
Will not install on Mac M1 (osx-arm64) architecture
#35
nmra-abarthmaron
opened
9 months ago
1
ERROR: Could not find a version that satisfies the requirement bioformats (from intake-io) (from versions: none) ERROR: No matching distribution found for bioformats
#34
MichelleKMS
opened
10 months ago
2
ERROR: Could not find a version that satisfies the requirement bioformats (from intake-io) (from versions: none) ERROR: No matching distribution found for bioformats
#33
MichelleKMS
closed
10 months ago
0
Installation failed intake_io and bioformats
#31
hongzhan2015
opened
1 year ago
3
fixed yml
#30
mwu56jude
opened
1 year ago
0
Result storage in output folders
#29
tomMEM
closed
1 year ago
1
notebook for converting voxel size
#28
amedyukhina
closed
1 year ago
0
picture of the detected puncta in the output
#27
matwgmkw
closed
1 year ago
1
update
#26
amedyukhina
closed
1 year ago
0
update
#25
amedyukhina
closed
1 year ago
0
pad with 0 before calculating sphericity
#24
amedyukhina
closed
1 year ago
0
calculate sphericity
#23
amedyukhina
closed
1 year ago
0
separate frequent and advanced parameters
#22
amedyukhina
closed
2 years ago
0
optimize parameter definition
#21
amedyukhina
closed
2 years ago
0
Parameters sensitive to individual cell intensity
#20
dwbaggett
opened
2 years ago
1
Trimming of for Cellpose
#19
dwbaggett
opened
2 years ago
1
Display LoG transformed image during puncta_setup.
#18
dwbaggett
closed
2 years ago
0
update version
#17
amedyukhina
closed
2 years ago
0
Installation error: subprocess-exited-with-error, use_2to3 is invalid
#16
raecv
closed
2 years ago
2
puncta_thermo.update
#15
swarnendut
closed
2 years ago
0
puncta_thermo_output.quants
#14
swarnendut
closed
2 years ago
0
thermo.output_update
#13
swarnendut
closed
2 years ago
0
puncta_thermo_output
#12
swarnendut
closed
2 years ago
0
puncta_thermo_update
#11
swarnendut
closed
2 years ago
0
Revert "puncta_thermo_calc"
#10
swarnendut
closed
2 years ago
0
puncta_thermo_calc
#9
swarnendut
closed
2 years ago
0
Release 0.1.0
#8
amedyukhina
closed
2 years ago
0
Release 0.1.0
#7
amedyukhina
closed
2 years ago
0
bug fix
#6
amedyukhina
closed
2 years ago
0
two-channel cellpose segmentation + bug fixes
#5
amedyukhina
closed
2 years ago
0
Optimized plotting and parameter/notebook naming
#4
amedyukhina
closed
2 years ago
0
Added colocalization
#3
amedyukhina
closed
2 years ago
0
Bug fix
#2
amedyukhina
closed
2 years ago
0
updated installation
#1
amedyukhina
closed
2 years ago
0