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theislab
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bindome
Assembling of biomolecule binding data (TF/RNA) from genomics databases for ML-downstream.
MIT License
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fixes for writing pbm/selex
#23
ilibarra
closed
1 year ago
0
add wget dependency
#22
ivirshup
closed
1 year ago
0
fix download data and docstring
#21
ilibarra
closed
1 year ago
0
Move wget
#20
ivirshup
closed
1 year ago
0
Add pre commit
#19
ivirshup
closed
1 year ago
0
Chipatlas seq download
#18
ilibarra
closed
1 year ago
1
Fixing CI (Add missing dependencies)
#17
ivirshup
closed
1 year ago
0
Generic downloader function for ChIP-atlas
#16
ilibarra
opened
1 year ago
0
Enable CI
#15
ivirshup
closed
1 year ago
0
Add function to calculate normalization factor for chipatlas
#14
ivirshup
closed
1 year ago
0
Function to convert ChIP-atlas bigWig to raw counts
#13
ilibarra
closed
1 year ago
2
Pip
#12
ilibarra
closed
1 year ago
0
Scanpy not in dependencies
#11
TomMB45
opened
2 years ago
0
Including the affreg dataset (PBM data)
#10
ilibarra
closed
2 years ago
0
Chip atlas
#9
ilibarra
closed
2 years ago
1
chipatlas.py function doesn't work
#8
TomMB45
opened
2 years ago
0
RNA datasets - list and priority.
#7
ilibarra
opened
2 years ago
0
loader for processed PBM data (uniprobe)
#6
ilibarra
closed
2 years ago
1
data loader structure
#5
davidsebfischer
opened
2 years ago
1
fixing mapping of library name, based on code from filename "XN"
#4
ilibarra
closed
2 years ago
0
Gr dataset
#3
ilibarra
closed
2 years ago
0
adding multibatch loading function (bindome)
#2
ilibarra
closed
2 years ago
0
function to load multiple tf and zero together
#1
ilibarra
closed
2 years ago
0