thibautjombart adegenet issues

thibautjombart / adegenet

adegenet: a R package for the multivariate analysis of genetic markers

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issues

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move spdep to suggests

#316 zkamvar closed 3 years ago
0
Move spdep to suggests

#315 zkamvar closed 3 years ago
0
Set all parallel = FALSE

#314 zkamvar closed 3 years ago
1
Better handling of parallel computation (or lack of) for Windows users

#313 courtiol closed 2 years ago
3
ERROR: number of cluster centres must lie between 1 and nrow(x)

#312 kopelol closed 3 years ago
3
Remove exportPattern() from NAMESPACE

#311 zkamvar opened 3 years ago
1
prepare for CRAN release

#310 zkamvar closed 3 years ago
0
New release to add missing doc on snapclust

#309 thibautjombart closed 3 years ago
1
`dim()` primitive behavior change with dist objects on load

#308 zkamvar closed 2 years ago
4
Issues with June 5, 2021 Tutorial

#307 neellab-umd closed 3 years ago
8
Update tutorials; add script

#306 zkamvar closed 3 years ago
1
Error in glPca(gl.fish, nf = 3, parallel = TRUE) : NAs detected in the vector of means

#305 OmidJa closed 3 years ago
9
glPca and dapc freezing -- am I picking the wrong nf?

#304 konradtaube opened 3 years ago
1
What to pass to find.clusters when doing PCA first?

#303 nicolettacommins opened 3 years ago
0
there is no package called ‘units’

#302 patrilia001 closed 3 years ago
1
Function for observed heterozygosity per pop?

#301 courtiol closed 3 years ago
5
lag.listw(listw, x, TRUE) : object lengths differ error, with own distance matrix in sPCA

#300 EveTC closed 3 years ago
1
pairwise.fast(sim2pop) function not working ?

#299 sunnyEV opened 3 years ago
7
Documentation bug: glPca parallel is FALSE by default, docs say it's TRUE

#298 plantarum closed 3 years ago
3
tab(microbov, NA.method="mean", freq = FALSE) returns a numeric matrix instead of integer. Is this expected?

#297 ptcooper closed 8 months ago
11
method for sorting compoplot by population?

#296 MycoPunk opened 4 years ago
4
no need to escape "|" as a separator in df2genind

#295 jean-baka opened 4 years ago
2
legend disappear when i export pdf

#294 zxy1555847 opened 4 years ago
1
sPCA colorplot with more than 3 significant PCs

#293 Katrinhoh opened 4 years ago
1
add support for parallel in find.clusters

#292 timflutre opened 4 years ago
2
Negative BIC values from find.clusters

#291 mep19 closed 4 years ago
1
Variance explained by PCA does NOT reach a plateau

#290 Carol-Symbiomics opened 4 years ago
1
find.clusters not working

#289 subha-sorghum opened 4 years ago
3
How to make find.clusters accepts the principle components?

#288 NamLQ closed 4 years ago
1
adding doc for snapclust

#287 thibautjombart closed 4 years ago
3
Adding doc for snapclust

#286 thibautjombart closed 3 years ago
0
Very slow find.clusters and dapc computation

#285 vlattko opened 4 years ago
2
release version 2.1.3

#284 zkamvar closed 4 years ago
0
Closing parenthesis in find.clusters() choose the number of clusters

#283 knausb closed 4 years ago
4
Large dataset syndrome NA values

#282 dmacguigan opened 4 years ago
3
Reading Triploid VCF in useable adegenet object

#281 laurelfloral opened 4 years ago
2
nancycats file data inconsistent with .rda

#280 pdimens opened 4 years ago
1
we should be able to enter distance through an argument

#279 romunov closed 4 years ago
1
Basic tutorial uses hierfstat::pairwise.fst, which no longer exists

#278 plantarum closed 3 years ago
7
Error with splitStrata(x) <- value

#277 Barsha-P closed 4 years ago
1
update warning messages to be clearer

#276 zkamvar closed 4 years ago
0
use inherits instead of class(x) ==

#275 zkamvar closed 4 years ago
1
"entirely non-type individual(s) deleted" warning is unclear

#274 plantarum closed 4 years ago
4
Fix scaleGen example and use Authors@R

#273 courtiol closed 4 years ago
5
issues installing adeneget

#272 taniachavarria79 closed 4 years ago
2
Add pop argument to genlight bracket accessor

#271 zkamvar closed 4 years ago
3
seppop doesn't work on genlight objects in latest version

#270 rdinnager closed 4 years ago
1
Cannot load adegenet

#269 gibedini closed 4 years ago
6
CRAN release

#268 zkamvar closed 4 years ago
0
Znk fix 265

#267 zkamvar closed 4 years ago
1

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