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tkchafin
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busco
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Create new workflows for each mode (genome, transcriptome and protein)
#26
PeteDockrill
opened
4 weeks ago
0
Update README and generate first draft docs
#25
tkchafin
opened
1 month ago
0
Bbtools dev
#24
PeteDockrill
closed
1 month ago
0
Post-HMMER summary file generation
#23
tkchafin
closed
1 month ago
3
BUSCO_GENERATEPLOT
#22
tkchafin
opened
1 month ago
1
Read in run parameters using a samplesheet to allow batch mode
#21
tkchafin
opened
1 month ago
2
subworkflow hierarchy
#20
tkchafin
opened
1 month ago
1
Better support for custom inputs
#19
tkchafin
opened
1 month ago
0
Add domain setting to the prep subworkflow
#18
tkchafin
opened
1 month ago
0
scale tool resource requirements by genome size
#17
tkchafin
closed
3 weeks ago
1
NCBI datasets fails -- too many requests
#16
tkchafin
closed
1 month ago
2
Container image exposing BUSCO API
#15
tkchafin
closed
1 month ago
2
Module to download/format BUSCO ODB
#14
tkchafin
closed
1 month ago
0
BBTools
#13
tkchafin
closed
1 month ago
3
Get BUSCO running locally and verify input/outputs
#12
tkchafin
closed
1 month ago
0
Move prep functions into a subworkflow.
#11
tkchafin
opened
1 month ago
0
SEPP module
#10
tkchafin
opened
1 month ago
3
tblastn subworkflow
#9
tkchafin
opened
1 month ago
1
HMMER
#8
tkchafin
closed
1 month ago
5
miniprot subworkflow
#7
tkchafin
closed
1 month ago
2
prodigal subworkflow
#6
tkchafin
opened
1 month ago
1
Augustus from nf-core/genomeannotator
#5
tkchafin
opened
1 month ago
1
metaeuk subworkflow
#4
tkchafin
opened
1 month ago
7
NCBI_GETODB from sanger-tol/genomenote
#3
tkchafin
closed
1 month ago
0
EXTRACT_BUSCOGENE from treeval
#2
tkchafin
opened
1 month ago
0
Sketch out BUSCO subway map
#1
tkchafin
closed
1 month ago
1