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tlambert03
/
nd2
Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction
https://tlambert03.github.io/nd2
BSD 3-Clause "New" or "Revised" License
53
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15
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error while loading nd2 image
#91
jboulanger
closed
2 years ago
9
fix: Fix images where widthPx x Bytes is not the same as expected width Bytes
#90
tlambert03
closed
2 years ago
0
ci: [pre-commit.ci] autoupdate
#89
pre-commit-ci[bot]
closed
2 years ago
0
Some datasets appear skewed in Ubuntu
#88
aaristov
closed
2 years ago
3
feat: Add native macosx-arm64 (M1) support
#87
tlambert03
closed
2 years ago
0
[test-bot] pip install --pre is failing
#86
github-actions[bot]
closed
2 years ago
0
Implement sub-frame read/chunking
#85
tlambert03
opened
2 years ago
12
ci(dependabot): bump pypa/cibuildwheel from 2.8.1 to 2.9.0
#84
dependabot[bot]
closed
2 years ago
0
ValueError for the big 2d image in the get_frame method
#83
GinYoshida
closed
2 years ago
3
ci: [pre-commit.ci] autoupdate
#82
pre-commit-ci[bot]
closed
2 years ago
0
ci(dependabot): bump pypa/cibuildwheel from 2.8.0 to 2.8.1
#81
dependabot[bot]
closed
2 years ago
0
ci(dependabot): bump pypa/cibuildwheel from 2.7.0 to 2.8.0
#80
dependabot[bot]
closed
2 years ago
0
fix: Typo in legacy requirements
#79
ghost
closed
2 years ago
1
Position names are 'None'
#78
gatoniel
closed
2 years ago
9
ci: [pre-commit.ci] autoupdate
#77
pre-commit-ci[bot]
closed
2 years ago
0
nd2[legacy] dependency
#76
ghost
closed
2 years ago
4
Feature: add benchmarks
#75
tlambert03
closed
1 year ago
1
feat: add `read_using_sdk` parameter, default to True for compressed files
#74
tlambert03
closed
2 years ago
0
[test-bot] pip install --pre is failing
#73
github-actions[bot]
closed
2 years ago
0
ND2 files saved with lossless compression do not open correctly.
#72
kthorn
closed
2 years ago
4
only metadata
#71
Heerpa
closed
2 years ago
6
read speed
#70
Heerpa
closed
2 years ago
2
ci(dependabot): bump pypa/cibuildwheel from 2.6.1 to 2.7.0
#69
dependabot[bot]
closed
2 years ago
0
ci(dependabot): bump pypa/cibuildwheel from 2.6.0 to 2.6.1
#68
dependabot[bot]
closed
2 years ago
0
ci(dependabot): bump actions/setup-python from 3 to 4
#67
dependabot[bot]
closed
2 years ago
0
docs: update readme
#66
tlambert03
closed
2 years ago
0
fix: remove print statement
#65
tlambert03
closed
2 years ago
0
fix: fix pre-test by using PyArray_SetBaseObject directly
#64
tlambert03
closed
2 years ago
0
ci: use flake8-pyprojecttoml
#63
tlambert03
closed
2 years ago
0
[test-bot] pip install --pre is failing
#62
github-actions[bot]
closed
2 years ago
0
ci: update prefix on dependabot commit message
#61
tlambert03
closed
2 years ago
0
ci(dependabot): Bump codecov/codecov-action from 2 to 3
#60
dependabot[bot]
closed
2 years ago
1
ci: create dependabot.yml
#59
tlambert03
closed
2 years ago
0
ci: General repo update, move to pyproject.toml
#58
tlambert03
closed
2 years ago
0
build: remove extra numpy from install_requires
#57
tlambert03
closed
2 years ago
0
[pre-commit.ci] pre-commit autoupdate
#56
pre-commit-ci[bot]
closed
2 years ago
0
fix numpy 1.22.4 bug
#55
tlambert03
closed
2 years ago
0
Fix frame offsets when validate_frames != True, add `validate_frames` param to `imread`
#54
tlambert03
closed
2 years ago
0
Shared library problems
#53
shenker
closed
2 years ago
7
update pre-commit
#52
tlambert03
closed
2 years ago
0
Refactor fixup
#51
shenker
closed
2 years ago
3
Slow creation of ND2File object from large ND2 files
#50
KaSaBe
closed
2 years ago
9
Pip Installation fails - Double requirement given: numpy
#49
SachidanandAlle
closed
2 years ago
7
Potential secutiry vulnerabilities in the shared libraries which nd2 depends on. Can you help upgrade to patch versions?
#48
MikeWazoWski123
closed
2 years ago
1
[pre-commit.ci] pre-commit autoupdate
#47
pre-commit-ci[bot]
closed
2 years ago
1
Fix numpy pinning in wheels
#46
tlambert03
closed
2 years ago
1
Incompatibility with numpy<=1.21
#45
zjniu
closed
2 years ago
4
Add utility to try to rescue frames from a corrupted nd2 file
#44
tlambert03
closed
2 years ago
2
update SDK license
#43
tlambert03
closed
2 years ago
0
add gh release action
#42
tlambert03
closed
2 years ago
0
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