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tobiasgf
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lulu
r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)
GNU Lesser General Public License v3.0
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LULU settings to use it to simply cluster at a given threshold?
#21
lplough
opened
7 months ago
1
min ratio setting explained
#20
mimouschka
opened
7 months ago
1
fixing dplyr deprecated funs()
#19
gabrielet
closed
11 months ago
0
warning message! `funs()` was deprecated in dplyr 0.8.0.
#18
adriantich
opened
1 year ago
4
how to set OTU similarity using lulu parameters?
#17
gabrielet
closed
7 months ago
7
Error in if (relative_cooccurence >= minimum_relative_cooccurence) { : missing value where TRUE/FALSE needed
#16
panstrongylus
opened
2 years ago
1
Can't install due to a malformed line...
#15
pollingmarcel
opened
2 years ago
2
Change the progress bar
#14
adrientaudiere
opened
2 years ago
0
Remove vsearch
#13
evaegelyng
closed
2 years ago
0
Installation instruction not complete...
#12
Thomieh73
opened
3 years ago
0
Input with OTU's as columns (not rows)
#11
ptpell77
closed
3 years ago
2
Child below `minimum_match` similarity merged
#10
ewmorr
opened
3 years ago
0
uc2otutab.py not producing otu table in Alfa_DADA2_vsearch.sh
#9
lplough
opened
4 years ago
0
potential parents with a relative cooccurence < 1.0 are never accepted
#8
frederic-mahe
opened
4 years ago
1
Error in if (relative_cooccurence >= minimum_relative_cooccurence) { : missing value where TRUE/FALSE needed
#7
anslan
closed
4 years ago
1
Suggestion: Use message instead of print for progress report
#6
VascoElbrecht
opened
4 years ago
0
Typo
#5
frederic-mahe
opened
4 years ago
0
Typo
#4
frederic-mahe
opened
4 years ago
0
buildOTUtable_simple.sh missing from repo
#3
Talitrus
closed
4 years ago
1
Tag a release, CRAN or Bioconductor?
#2
nextgenusfs
opened
6 years ago
2
empty curated table fix
#1
jack1120
opened
6 years ago
1