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ucl-pond
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pySuStaIn
Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.
MIT License
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IndexError during CV
#59
katrinaCode
opened
1 month ago
0
selecting the best number of subtypes
#58
xullllllll
opened
1 month ago
0
selecting the best number of subtypes
#57
xullllllll
closed
1 month ago
0
selecting the best number of subtypes
#56
xullllllll
closed
1 month ago
0
Mixed Data Types
#55
abadgerw
opened
1 month ago
0
Two questions in ZscoreSustain
#54
xullllllll
closed
1 month ago
4
Two questions in ZscoreSustain
#53
xullllllll
closed
1 month ago
0
subtype_and_stage_individuals_newData performance issue
#52
88vikram
opened
2 months ago
0
About some installation error
#51
Teemoninja
closed
2 months ago
1
Apply the trained model to external/independent data
#50
anbai106
closed
3 months ago
2
Enabling PVD Plot Legends
#49
katrinaCode
opened
5 months ago
1
ValueError in AbstractSuStaIn
#48
katrinaCode
closed
1 year ago
10
Example code for mixture_KDE
#47
alexander-ratzan
closed
1 year ago
3
Validate models with BIC
#46
Seymour22
opened
1 year ago
0
Add files via upload
#45
Seymour22
opened
1 year ago
4
[Question] Can we discover subtypes in a training test, and use the discovered subtypes to subtype subjects of a test set?
#44
little-nem
closed
1 year ago
1
minor installation issue with sklearn
#43
illdopejake
closed
1 year ago
1
Allow for complete model reloading
#42
sea-shunned
opened
1 year ago
2
Parallelization fails -- TypeError: cannot pickle '_abc._abc_data' object
#41
katrinaCode
opened
1 year ago
4
Mislabelled subtype numbers in PVDs
#40
Bea-Taylor
opened
1 year ago
9
Ordinal Sustain Notebook
#39
mmontazeri2001
opened
1 year ago
3
Addresses issue 37
#38
noxtoby
closed
1 year ago
1
Parallel CV doesn't work (aka "Why do all my CV jobs run for fold 0 only???")
#37
noxtoby
closed
1 year ago
1
Question on Using pySuStaIn on ADNI
#36
lmz123321
closed
2 years ago
3
How to interpret the Positional Variance Diagram
#35
lmz123321
closed
2 years ago
1
Data Preparation Pipeline/Code
#34
lmz123321
closed
2 years ago
5
IndexError while running the SuStaIn Workshop file
#33
chinei
closed
2 years ago
2
Adding a colourbar to PVD plots
#32
sea-shunned
opened
2 years ago
6
Idea: SusStaIn constraint with longitudinal measures
#31
gdevenyi
opened
2 years ago
6
PVD Plotting Update
#30
sea-shunned
closed
2 years ago
14
Added workshop notebook and data and updated existing tutorial notebook
#29
ayoung11
closed
2 years ago
0
Fix for "rare" divide by zero problem
#28
illdopejake
opened
2 years ago
6
`use_parallel_startpoints` fails on numpy 1.21
#27
noxtoby
opened
3 years ago
6
Update and improve RNG handling
#26
sea-shunned
closed
3 years ago
0
Make kde_ebm pluggable
#25
noxtoby
closed
3 years ago
1
Updated README
#24
ayoung11
closed
3 years ago
0
Updated README.md
#23
ayoung11
closed
3 years ago
0
Updated tutorial notebook
#22
ayoung11
closed
3 years ago
0
Fixing controls in GMM
#21
88vikram
closed
3 years ago
2
multiple sclerosis
#20
luantunez
closed
3 years ago
3
Adding tests & a few optimizations
#19
sea-shunned
closed
3 years ago
1
Added Zscore Missing Data version
#18
marestarellas
closed
3 years ago
2
TypeError: 'int' object is not iterable in ZscoreSustain
#17
88vikram
closed
3 years ago
8
Out of bounds issue in: self._optimise_parameters()
#16
rperea14
closed
3 years ago
3
Cross validation -- option to control # of threads
#15
illdopejake
opened
3 years ago
5
Validation test & reproducibility
#14
sea-shunned
closed
3 years ago
0
SuStaIn in pymc3, and Variational Inference?
#13
Sinha-Ujjawal
closed
2 years ago
1
Problem when defining high number of biomarkers
#12
simonepenna
closed
3 years ago
0
bug in cross-validation when using "select_fold"
#11
illdopejake
closed
3 years ago
2
Tutorial using simulated data
#10
ayoung11
closed
4 years ago
2
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