issues
search
uio-cels
/
NucDiff
In-depth characterization and annotation of differences between two sets of DNA sequences
Mozilla Public License 2.0
59
stars
10
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Nucdiff- visualization
#32
aksha19n
opened
1 month ago
0
Run time
#31
tdlong
opened
11 months ago
3
VCF files not compatbile with vcf-format
#30
cdebuck
opened
1 year ago
0
Hello
#29
hassantarabai
closed
1 year ago
1
Could not run Nucmer
#28
peflanag
opened
2 years ago
1
NucDiff waiting for input ("ku")
#27
schorlton
opened
2 years ago
1
ERROR: Could not parse input from 'stdin'. / postnuc returned non-zero
#26
sophie-03
opened
3 years ago
2
Ambiguous ("N") handling and Results interpretation
#25
chrisgulvik
closed
3 years ago
2
nucdiff error
#24
rthapa1
opened
3 years ago
3
NuCdiff block after get SNPs
#23
El-Castor
opened
3 years ago
7
Would NucDiff work comparing 2 phased assemblies?
#22
ghost
opened
4 years ago
0
Confusions about SV results
#21
qiuyixmm
opened
4 years ago
2
default override via. --nucmer_opt '--nooptimize' ???
#20
moduff
opened
4 years ago
0
Confusion about the definition of inversion
#19
qiuyixmm
closed
4 years ago
0
KeyError: 'scaffold00001'
#18
JonEilers
closed
4 years ago
3
nucdiff hung when tring to find differences
#17
dbtara
closed
4 years ago
9
ERROR: mummer and/or mg aps returned non-zero
#16
Zhiliang-Zhang
opened
4 years ago
4
Update setup.py
#15
philres
opened
4 years ago
0
ERROR: The provided file with an assembly does not exist
#14
mamora
closed
4 years ago
2
problems running nucdiff
#13
mamora
closed
4 years ago
0
Mummer4
#12
JonEilers
closed
4 years ago
4
possible failure to detect a deletion
#11
dmnfarrell
closed
4 years ago
6
Run with no output
#10
davidaray
opened
4 years ago
8
why --maxmatch is hard code
#9
slbai01
closed
4 years ago
1
Installation issue? ValueError: Attempted relative import in non-package
#8
ckeeling
closed
5 years ago
5
Package Nucdiff for pypi and make py3 compatible
#7
zachcp
closed
6 years ago
0
Not able to run NucDiff on an existing .delta file generated by nucmer
#6
pulichandramoulireddy
closed
7 years ago
16
uncovered ref regions
#5
jaworskicoline
closed
7 years ago
4
same FastA content prints "Differences ... are found"
#4
chrisgulvik
closed
7 years ago
1
What version of python (2 or 3) is?
#3
tseemann
closed
7 years ago
1
Add to pypi - desire "pip install nucdiff"
#2
tseemann
opened
7 years ago
8
Make an updated release
#1
tseemann
closed
7 years ago
1