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vector-engineering
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covidcg
A COVID-19 CoV Genetics (CG) browser to inform therapeutics development
https://covidcg.org
MIT License
26
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5
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Fix GenBank date format in ingest download reqs
#649
atc3
closed
2 weeks ago
0
Adjust GenBank download chunks to not surpass today's date
#648
atc3
closed
1 month ago
0
Date cutoff fixes for GenBank pipelines
#647
atc3
closed
1 month ago
0
Tolerate frameshifting indels as long as they are resolved
#646
atc3
closed
1 month ago
0
Add H10 and new H7 ref
#645
atc3
closed
1 month ago
0
Flu Genbank release
#644
atc3
closed
3 months ago
0
v2.7.4 Flu patches and bug fixes
#643
atc3
closed
4 months ago
0
Hotfix for requests that don't explicitly specify sequence quality filters
#642
atc3
closed
5 months ago
0
Fix: fill missing surveillance counts with 0 instead of lirping between known values
#641
atc3
closed
5 months ago
1
Separate download for FASTA files via NCBI virus
#640
atc3
closed
4 months ago
0
Adaptable MOTD
#639
atc3
closed
5 months ago
0
Truncated main workflow
#638
atc3
closed
5 months ago
0
Hotfix - explicitly read latin-1 encoding from fasta files
#637
atc3
closed
6 months ago
0
Add sequence quality as metadata
#636
atc3
closed
5 months ago
0
Bump browserify-sign from 4.2.1 to 4.2.2
#635
dependabot[bot]
opened
8 months ago
0
Bump werkzeug from 2.0.2 to 3.0.1 in /services/server
#634
dependabot[bot]
opened
8 months ago
0
Bump @babel/traverse from 7.16.8 to 7.23.2
#633
dependabot[bot]
opened
8 months ago
0
Bump postcss, autoprefixer, css-loader, cssnano and postcss-loader
#632
dependabot[bot]
opened
9 months ago
0
PANGO annotations for SARS2 GISAID workflow
#631
atc3
closed
8 months ago
0
GenBank Flu site release
#630
atc3
closed
4 months ago
0
Update RSV copy
#629
atc3
closed
10 months ago
0
RSV homepage text edit
#628
chan-solo
closed
10 months ago
1
Bump socket.io-parser from 4.2.1 to 4.2.4
#627
dependabot[bot]
closed
10 months ago
1
Bump semver from 5.7.1 to 5.7.2
#626
dependabot[bot]
closed
10 months ago
1
Bump word-wrap from 1.2.3 to 1.2.4
#625
dependabot[bot]
closed
10 months ago
1
Bump socket.io-parser from 4.2.1 to 4.2.3
#624
dependabot[bot]
closed
11 months ago
1
Uncompress SARS2 feed file on the fly to save disk space
#623
atc3
closed
11 months ago
0
v2.7.4 - Flu data update
#622
atc3
closed
10 months ago
0
Bump flask from 1.1.2 to 2.3.2 in /services/server
#621
dependabot[bot]
closed
1 year ago
1
New flu subtypes (H5NX, H7NX, H9NX)
#620
atc3
closed
1 year ago
0
Additional coverage indicators
#619
atc3
opened
1 year ago
0
Add GCS CORS config
#618
atc3
closed
1 year ago
0
Post-hoc residue numbering adjustments
#617
atc3
closed
1 year ago
0
Server hotfixes - 230419
#616
atc3
closed
1 year ago
0
Mutation Frequency Report
#615
atc3
closed
1 year ago
0
Add workflow job to produce lineage mutation table (all time)
#614
atc3
closed
1 year ago
0
Bump vega-functions from 5.13.0 to 5.13.1
#613
dependabot[bot]
closed
1 year ago
1
Revert "Bump vega-functions from 5.13.0 to 5.13.1"
#612
atc3
closed
1 year ago
0
Bugfix - Primer queries
#611
atc3
closed
1 year ago
0
Bump ua-parser-js and browser-sync
#610
dependabot[bot]
closed
1 year ago
1
Bump vega from 5.22.1 to 5.23.0
#609
dependabot[bot]
closed
1 year ago
1
Bump vega-functions from 5.13.0 to 5.13.1
#608
dependabot[bot]
closed
1 year ago
0
Add more flu references
#607
atc3
closed
1 year ago
0
Bump werkzeug from 2.0.2 to 2.2.3 in /services/server
#606
dependabot[bot]
closed
1 year ago
1
Post-hoc residue numbering adjustments
#605
atc3
closed
1 year ago
0
Support missing segments in references
#604
atc3
closed
1 year ago
0
Update ignorefiles
#603
atc3
closed
1 year ago
0
Add credentials back to flu site
#602
atc3
closed
1 year ago
0
Pipeline email script
#601
atc3
closed
1 year ago
0
Empty Flu about page
#600
atc3
closed
10 months ago
0
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