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viash-hub
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biobox
🌱📦 A collection of bioinformatics tools for working with sequence data.
https://web.viash-hub.dev/package/biobox
MIT License
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Add agat convert sp gff2zff
#116
Leila011
opened
3 months ago
0
Add agat convert sp gff2tsv
#115
Leila011
opened
3 months ago
1
Add agat convert sp gff2bed
#114
Leila011
opened
3 months ago
0
Add agat convert minimap2 bam2gff
#113
Leila011
opened
3 months ago
0
Add agat convert mfannot2gff
#112
Leila011
closed
3 weeks ago
0
Bedtools bedtobam
#111
tgaspe
closed
3 months ago
0
Add agat sq stat basic
#110
Leila011
closed
3 weeks ago
1
Bedtools bamtobed
#109
tgaspe
closed
1 month ago
0
Bedtools bamtobed
#108
tgaspe
closed
4 months ago
0
Add agat sp statistics
#107
Leila011
closed
1 month ago
2
Add agat sp merge annotations
#106
Leila011
closed
1 month ago
0
Add agat sp filter feature from kill list
#105
Leila011
closed
1 month ago
0
Add agat sp add introns
#104
Leila011
closed
1 month ago
0
Add agat convert sp gxf2gxf
#103
Leila011
closed
3 months ago
0
Add agat convert spgff2tsv
#102
Leila011
closed
3 months ago
0
Bedtools_bamtofastq
#101
tgaspe
closed
3 months ago
0
Add agat convert genscan2gff
#100
Leila011
closed
2 months ago
2
Add agat convert embl2gff
#99
Leila011
closed
3 months ago
0
Bedtools sort
#98
tgaspe
closed
4 months ago
0
Add agat convert bed2gff
#97
Leila011
closed
4 months ago
0
BD rhapsody sequence analysis
#96
rcannood
closed
2 months ago
0
nanoplot
#95
sumanm99
closed
1 month ago
0
Bedtools_Intersect
#94
tgaspe
closed
4 months ago
0
Rsem-calculate-expression
#93
emmarousseau
closed
2 months ago
2
FastQC
#92
tgaspe
closed
2 months ago
3
Helper Functions
#91
tgaspe
closed
3 months ago
1
Helper Functions
#90
tgaspe
closed
3 months ago
0
Add RSEM prepare reference component
#89
sainirmayi
closed
3 months ago
1
fix authorship
#88
rcannood
closed
4 months ago
0
[star_genome_generate] Make arguments snake_case instead of camelCase
#87
rcannood
opened
4 months ago
0
switch to viash actions for ci
#86
rcannood
closed
4 months ago
0
Seqtk subseq
#85
tgaspe
closed
4 months ago
2
Seqtk - Suman Internship
#84
sumanm99
closed
3 months ago
1
Config file and help.txt file (seqtk subseq command)
#83
tgaspe
closed
4 months ago
0
Update CONTRIBUTING.md
#82
rcannood
closed
4 months ago
0
update multiple separator
#81
dorien-er
closed
4 months ago
0
Add authorship to components
#80
rcannood
opened
4 months ago
0
Fix typo
#79
rcannood
closed
4 months ago
0
Remove multiple_sep
#78
emmarousseau
closed
4 months ago
1
Get rid of multiple_sep
#77
rcannood
closed
4 months ago
0
Add agat convertspgff2gtf
#76
Leila011
closed
4 months ago
0
`bd_rhapsody_make_reference`: Create a reference for the BD Rhapsody pipeline
#75
rcannood
closed
4 months ago
0
Qualimap
#74
tverbeiren
closed
3 months ago
2
Feature/no ref/add bowtie2
#73
tverbeiren
opened
4 months ago
1
FEAT: update busco to 5.7.1
#72
DriesSchaumont
closed
4 months ago
0
UMI-tools extract
#71
emmarousseau
closed
4 months ago
0
BUG: pear component failure is ignored
#70
DriesSchaumont
closed
5 months ago
0
FEAT: Disable cutadapt demultiplexing by default
#69
DriesSchaumont
closed
5 months ago
0
Seqtk sample
#68
jakubmajercik
closed
4 months ago
0
BUG: permissions of falco output
#67
DriesSchaumont
closed
5 months ago
2
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