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vsbuffalo
/
scythe
A 3'-end adapter contaminant trimmer
MIT License
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There are still overrepresented sequences after scythe?
#34
Xiaofei-git
opened
5 years ago
0
why the adapter is not been removed?
#33
Xiaofei-git
closed
6 years ago
4
Using Sickle on Scythe output shows loss of trimming
#32
TactfulCactus
closed
6 years ago
0
Incorrect alignments of adapter sequences to reads
#31
ManoshiDatta
opened
6 years ago
1
Output file long option doesn't work
#30
lottpaul
opened
9 years ago
0
Make a Release so we can package for Brew?
#29
tseemann
opened
9 years ago
0
build error
#28
slengyel
closed
9 years ago
3
Debian packaging system
#27
kdm9
closed
9 years ago
5
gzip support
#26
enricoferrero
closed
9 years ago
1
Weird behavior
#25
dgpinheiro
opened
9 years ago
6
Proposal: bit-encoded sequence comparison
#24
kdm9
closed
9 years ago
0
feature request: support for indels in adapter sequences
#23
crmackay
opened
10 years ago
0
Documentation of adapters still refers to [NNNNN]
#22
jdblischak
opened
10 years ago
0
Keep makefile & readme versions in sync
#21
kdm9
closed
9 years ago
0
pull for latest scythe version
#20
ucdavis-bioinformatics
opened
10 years ago
1
Call fclose on output_fp when -o option is given
#19
kdm9
closed
10 years ago
1
Further optimisations
#18
kdm9
closed
10 years ago
0
Small optimisations to match.c
#17
kdm9
closed
10 years ago
1
Typo fix in libscythe.so target, LDFLAGS order fix in all targets.
#16
feltstykket
closed
10 years ago
0
Building can't find zlib and math functions on newer Ubuntu
#15
feltstykket
opened
10 years ago
3
readme wrong
#14
spikebike
closed
10 years ago
1
Fix the adapter in the matches report.
#13
jarondl
closed
10 years ago
4
trouble reading scythe output into qrqc
#12
ClarkLabUCB
opened
10 years ago
0
Interleave support
#11
vsbuffalo
opened
11 years ago
0
makefile error
#10
fgvieira
closed
11 years ago
1
Bug when wrong fastq encoding entered
#9
jfass
opened
11 years ago
0
Possible Makefile linux compatibility issue
#8
mylons
closed
11 years ago
1
Multiple definition errors
#7
ericminikel
closed
11 years ago
4
added bibliography, small edits elsewhere
#6
jfass
opened
11 years ago
0
Feature suggestion - for PE reads, check both reads at the same time
#5
jfass
opened
11 years ago
0
Feature suggestion--parallel processing reads
#4
seandavi
opened
12 years ago
5
Hey! My first pull request! For updated TruSeq adapter sequences, and better explanatory text in README
#3
jfass
closed
12 years ago
0
Sycthe is removing all strings in FASTQ headers that follow a space
#2
vsbuffalo
closed
12 years ago
1
segfault on osx
#1
brantfaircloth
closed
13 years ago
4