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waterlandlab
/
CluBCpG
Cluster-based analysis of CpG methylation
https://clubcpg.readthedocs.io/
MIT License
10
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6
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Bump jinja2 from 3.1.2 to 3.1.3
#28
dependabot[bot]
opened
5 months ago
0
Bump certifi from 2023.5.7 to 2023.7.22
#27
dependabot[bot]
closed
7 months ago
0
Bump urllib3 from 2.0.3 to 2.0.7
#26
dependabot[bot]
closed
7 months ago
0
Bump urllib3 from 2.0.3 to 2.0.6
#25
dependabot[bot]
closed
8 months ago
1
Modernize ClubCpG dependencies and dev environment
#24
canthonyscott
closed
12 months ago
1
Update deprecated setup.py to more modern pyproject.toml
#23
canthonyscott
closed
12 months ago
0
Bump scipy from 1.4.1 to 1.10.0
#22
dependabot[bot]
closed
12 months ago
1
Add CodeQL workflow for GitHub code scanning
#21
lgtm-com[bot]
opened
1 year ago
0
Bump numpy from 1.16.5 to 1.22.0
#20
dependabot[bot]
closed
12 months ago
1
Bump numpy from 1.16.5 to 1.21.0
#19
dependabot[bot]
closed
2 years ago
1
fixed bug where bin size was not correctly being passed to clustering
#18
canthonyscott
closed
2 years ago
0
Bug in clustering with 150-bp bins
#17
mohamadysn
closed
2 years ago
4
Invalid literal error when running clubcpg-cluster
#16
DLGisch
closed
2 years ago
4
CluBCpG for RRBS data?
#15
AndriesDeKoker
opened
3 years ago
2
ReadTheDocs auto-build failing
#14
canthonyscott
closed
2 years ago
1
Dep ver updates
#13
canthonyscott
closed
3 years ago
0
Not able to reproduce results for SampleData
#12
pelutz
closed
3 years ago
3
clubcpg-coverage error
#11
kjdudley
closed
3 years ago
1
Comparative analysis for more than two libraries from two groupings?
#10
ben-laufer
closed
3 years ago
1
Dev
#9
canthonyscott
closed
4 years ago
1
Raise the logging level in the next release
#8
canthonyscott
closed
2 years ago
0
very large log files
#7
cjgunase
closed
4 years ago
2
Fixes a long standing issue in which the indels on reads cause the loss of an entire bin from the data output
#6
canthonyscott
closed
4 years ago
1
Permissions corrections
#5
canthonyscott
closed
4 years ago
0
Permutations
#4
canthonyscott
closed
4 years ago
1
Prepare for pypi
#3
canthonyscott
closed
4 years ago
0
code cleanup
#2
canthonyscott
closed
5 years ago
2
Code cleanup
#1
canthonyscott
closed
5 years ago
1