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wejlab
/
animalcules
R shiny app for interactive microbiome analysis
https://wejlab.github.io/animalcules-docs/
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Add more distance metrics for PCoA
#20
anfederico
closed
5 years ago
0
resolve biocCheck warnings and notes
#19
jasonzhao0307
closed
5 years ago
0
Output vignette to GitHub-compatible README
#18
anfederico
closed
5 years ago
0
package size NOTE
#17
jasonzhao0307
closed
5 years ago
0
Fix devtools:check() run time too long issue
#16
jasonzhao0307
closed
5 years ago
5
add a logo
#15
jasonzhao0307
closed
5 years ago
1
Fix the building errors
#14
jasonzhao0307
closed
5 years ago
0
modify DE
#13
jasonzhao0307
closed
5 years ago
0
Check all figures, make sure the y-axis and x-axis name makes sense to users
#12
jasonzhao0307
closed
5 years ago
0
Change the PCoA 1st and 2nd option name to principle coordinate instead of principle components
#11
jasonzhao0307
closed
5 years ago
0
Make the Mann Whitney test name consistent for the stat result table name
#10
jasonzhao0307
closed
5 years ago
0
Add a ROC plot to biomarker page
#9
jasonzhao0307
closed
5 years ago
0
Add t-SNE and Umap to dim reduction page
#8
jasonzhao0307
closed
5 years ago
0
Make default tax level being phylum
#7
jasonzhao0307
closed
5 years ago
0
Make each page as simple as possible
#6
jasonzhao0307
closed
5 years ago
0
Add one or two more example datasets and user could select which example dataset to use
#5
jasonzhao0307
closed
5 years ago
0
Here are some changes to help R CMD CHECK work, but there still are some changes needed
#4
wevanjohnson
closed
5 years ago
0
Fixing some errors on the alignment function (and other functions) that caused R CMD CHECK to fail. I think there are some examples that still fail from others
#3
wevanjohnson
closed
5 years ago
1
Adding changes to the demultiplex functions and adding functions for …
#2
wevanjohnson
closed
5 years ago
0
Adding function for refseq reference library download
#1
wevanjohnson
closed
5 years ago
0
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