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willsheffler
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rpxdock
protein docking stuff
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Installation Errors
#91
biomashaohua
opened
4 months ago
0
out of bounds error when using -1 in allowed_residues
#90
yhsia
opened
9 months ago
0
hscore pickles
#89
LaurinLang
opened
1 year ago
0
reverse --max_longaxis_dot_z
#88
LaurinLang
opened
1 year ago
0
rpxdock/doc/concepts /rpx.rst
#87
LaurinLang
opened
1 year ago
0
issue with pandas 0.24.2
#86
hy3n4e
opened
1 year ago
0
--fixed_trans and --fixed_wiggle do not seem to be working correctly
#85
jennastanislaw
opened
1 year ago
0
option to "mask" or hide/not clash check certain residues
#84
yhsia
opened
1 year ago
0
--clashdis option needs to be fixed
#83
yhsia
opened
1 year ago
1
Erinyang/rpxdock to design
#82
erincyang
closed
1 year ago
0
Erinyang/rpxdock to design
#81
erincyang
closed
1 year ago
0
pytest failed in some function
#80
roc0186
opened
1 year ago
5
dump_closest does not work for 1-component systems
#79
yhsia
opened
1 year ago
0
Erinyang/rpxdock to design
#78
erincyang
closed
1 year ago
0
Added rpxdock to rosetta design executable and xml
#77
erincyang
closed
1 year ago
1
Error when running
#76
LucasCRK
opened
1 year ago
1
some compiling questions
#75
blablasusu
opened
2 years ago
1
layer symmetry to dump corresponding symdef file when pdb is dumped
#74
yhsia
opened
2 years ago
0
fixed axel --> axle
#73
erincyang
closed
2 years ago
0
layer docking redundancy check needs to check more symmetrical versions
#72
yhsia
opened
2 years ago
1
fixed axel again
#71
erincyang
closed
2 years ago
0
add in a check for None when missing allowed_res
#70
yhsia
closed
2 years ago
0
Erinyang
#69
erincyang
closed
2 years ago
0
fixed axel spec
#68
erincyang
closed
2 years ago
0
Sheffler/required res
#67
yhsia
closed
2 years ago
0
Revert "adding capability to `--allowed_residues_also`"
#66
yhsia
closed
2 years ago
0
what is pickle file and how to read it ?
#65
1497415080
closed
2 years ago
1
adding capability to `--allowed_residues_also`
#64
yhsia
closed
2 years ago
0
Layer docking sometimes produces self clashes
#63
yhsia
opened
2 years ago
0
asym docking resolution fix
#62
yhsia
closed
2 years ago
0
asym docking is totally stupid
#61
willsheffler
closed
2 years ago
0
using different `cart_bounds` values significantly(?) changes output results even if the complex isn't that big?
#60
yhsia
closed
2 years ago
0
Erinyang/rpxdock qc
#59
erincyang
closed
2 years ago
0
Merge layer cyl
#58
chelseanfries
closed
2 years ago
0
Layers cylinders
#57
chelseanfries
closed
2 years ago
0
Layers cylinders
#56
chelseanfries
closed
2 years ago
0
add dumping of summary result files
#55
yhsia
closed
2 years ago
0
option to dump results summary as a text file along with result object
#54
yhsia
closed
2 years ago
1
layer and cylinder integration
#53
chelseanfries
closed
2 years ago
0
bugfix for cases where filter removes ALL viable docks
#52
yhsia
closed
2 years ago
0
filters dump `ERROR_log.pickle` even if not all results were filtered out
#51
yhsia
opened
2 years ago
0
Implement: have multiple patches of interface be required when `--allowed_resis` is passed
#50
yhsia
closed
2 years ago
0
`--trim_resis` and/or `--trim_helix` is broken
#49
yhsia
opened
2 years ago
0
`--score_self` is broken
#48
yhsia
opened
2 years ago
0
suspicious quotation marks when extracting from *.txz result files
#47
yhsia
opened
2 years ago
0
Layer fixed merger
#46
chelseanfries
closed
2 years ago
1
Clarified architecture option
#45
erincyang
closed
2 years ago
0
Documentation: Installation and Example usage
#44
smturzo
closed
2 years ago
2
Jenstanisl/termini access dir
#43
jennastanislaw
closed
2 years ago
1
Bump numpy from 1.21.0 to 1.22.0
#42
dependabot[bot]
closed
2 years ago
0
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