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wmayner
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pyphi
A toolbox for integrated information theory.
https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006343
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New Subsystem With Forward and Backward TPMs
#122
ajbailey4
closed
3 weeks ago
2
Fix 4.0 links in docs
#121
matteograsso
closed
3 months ago
0
Update docs
#120
matteograsso
closed
3 months ago
0
Update index.rst
#119
matteograsso
closed
3 months ago
0
Update index.rst
#118
matteograsso
closed
3 months ago
0
Notebook for recording # of nodes and processing time
#117
HireTheHero
opened
4 months ago
0
Avoiding circular import by renaming pandas.py
#116
HireTheHero
opened
4 months ago
0
Scalability to large network
#115
HireTheHero
closed
4 months ago
6
put strong connectivity check in config.SHORTCIRCUIT_SIA.
#114
Astrocytes120
opened
6 months ago
0
Feature/iit 4.0
#113
isacdaavid
closed
6 months ago
0
pyphi execution hangs after outputting one line
#112
nickums
closed
6 months ago
2
Update an option for checking the strong connectivity of connectivity matrix.
#111
Astrocytes120
closed
6 months ago
3
Version 1.2.1 has never been released
#110
penguinpee
opened
10 months ago
0
Fixed Iterator issue
#109
Mayank447
closed
11 months ago
1
Python3.12: Tests fail
#108
penguinpee
opened
11 months ago
2
Import error
#107
Shahik15
closed
1 year ago
1
Initial support for Implicit TPMs
#105
isacdaavid
opened
1 year ago
0
Fix syntax for `ImplicitTPM.__hash__()`
#104
dviggiano
closed
1 year ago
0
Fix subsystem validation and implement hashing for ImplicitTPM
#103
dviggiano
closed
1 year ago
0
node.py: Avoid circular import
#102
dviggiano
closed
1 year ago
0
generate_nodes(): Handle Implicit network TPMs
#101
dviggiano
closed
1 year ago
0
Do not use `tpm.tpm`
#100
dviggiano
closed
1 year ago
0
Use `hasattr` instead of try-catch
#99
dviggiano
closed
1 year ago
0
Add state_space to node construction in tests
#98
dviggiano
closed
1 year ago
0
Add state space reroute
#97
dviggiano
closed
1 year ago
0
Add equals method to ImplicitTPM
#96
dviggiano
closed
1 year ago
0
test_network: Add test_init_with_explicit_tpm()
#95
dviggiano
closed
1 year ago
0
Network.__repr__(): Only use dict for state_space
#94
dviggiano
closed
1 year ago
0
test_build_cm(): Combine into one test
#93
dviggiano
closed
1 year ago
0
test_build_cm_explicit_tpm(): Use np.ones()
#92
dviggiano
closed
1 year ago
0
test_network.test_build_cm_explicit_tpm(); Allow for DictCache reconstruction with __repr__()
#91
dviggiano
closed
1 year ago
0
Create new test in test_network: test_build_cm_implicit_tpm()
#90
dviggiano
closed
1 year ago
0
Network._build_cm(): Account for Iterable TPM argument
#89
dviggiano
closed
1 year ago
0
Feature/tpm class
#88
dviggiano
closed
1 year ago
0
Feature/tpm class
#87
dviggiano
closed
1 year ago
0
Update tests: test_config_validation() and test_repertoire_shape()
#86
dviggiano
closed
1 year ago
0
Utilize new OrderableByPhi mixin, and edit several models to only compare to others by phi values
#85
dviggiano
closed
1 year ago
0
Only order RIA by Phi
#84
dviggiano
closed
1 year ago
0
Refactor models and tests, specifically RIA
#83
dviggiano
closed
1 year ago
0
test_metrics()
#82
dviggiano
closed
1 year ago
1
_validate_probabilities(): Allow rtol of 1e-15
#81
dviggiano
closed
1 year ago
0
subsystem: Throw error if nodes don't match cut
#80
dviggiano
closed
1 year ago
0
ExplicitTPM: Numpy universal funcs and NDArrayOperatorsMixin
#79
isacdaavid
closed
1 year ago
1
`docs/examples`: add 4.0 demo notebook
#78
isacdaavid
closed
1 year ago
0
Python 3.8 support
#77
isacdaavid
closed
1 year ago
0
Also add `PARALLEL_PURVIEW_EVALUATION` option into config file
#76
isacdaavid
closed
1 year ago
0
Add option PARALLEL_PURVIEW_EVALUATION
#75
isacdaavid
closed
1 year ago
0
Small workaround to coerce working with ExplicitTPMs at Subsystem
#74
isacdaavid
closed
1 year ago
0
Improved ExplicitTPM API and method semantics (now with array methods for free)
#73
isacdaavid
closed
1 year ago
0
Sync feature/tpm-class to follow feature/iit-4.0
#72
isacdaavid
closed
1 year ago
0
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