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wmayner
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pyphi
A toolbox for integrated information theory.
https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006343
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Limit plotting to 2 and 3 relations
#130
matteograsso
opened
2 weeks ago
0
Collections imports outdated
#129
OverCV
opened
2 weeks ago
0
When current state is unreachable, catch division by zero in cause TPM.
#128
isacdaavid
closed
3 weeks ago
0
Optional argument to limit `repertoire.forward_cause_repertoire()` to specified purview state
#127
isacdaavid
closed
2 months ago
0
Fix purview plotting bug
#126
ajbailey4
closed
2 months ago
0
Added PurviewCoordinates class for plotting purviews next to mechanisms
#125
ajbailey4
closed
2 months ago
1
Minor corrections to documentation.
#124
isacdaavid
closed
4 months ago
0
Update Tests for 4.0
#123
ajbailey4
closed
3 months ago
1
New Subsystem With Forward and Backward TPMs
#122
ajbailey4
closed
5 months ago
2
Fix 4.0 links in docs
#121
matteograsso
closed
8 months ago
0
Update docs
#120
matteograsso
closed
8 months ago
0
Update index.rst
#119
matteograsso
closed
8 months ago
0
Update index.rst
#118
matteograsso
closed
8 months ago
0
Notebook for recording # of nodes and processing time
#117
HireTheHero
opened
9 months ago
0
Avoiding circular import by renaming pandas.py
#116
HireTheHero
opened
9 months ago
0
Scalability to large network
#115
HireTheHero
closed
9 months ago
6
put strong connectivity check in config.SHORTCIRCUIT_SIA.
#114
Astrocytes120
opened
11 months ago
0
Feature/iit 4.0
#113
isacdaavid
closed
11 months ago
0
pyphi execution hangs after outputting one line
#112
nickums
closed
10 months ago
2
Update an option for checking the strong connectivity of connectivity matrix.
#111
Astrocytes120
closed
11 months ago
3
Version 1.2.1 has never been released
#110
penguinpee
opened
1 year ago
0
Fixed Iterator issue
#109
Mayank447
closed
1 year ago
1
Python3.12: Tests fail
#108
penguinpee
opened
1 year ago
2
Import error
#107
Shahik15
closed
1 year ago
1
Initial support for Implicit TPMs
#105
isacdaavid
opened
1 year ago
0
Fix syntax for `ImplicitTPM.__hash__()`
#104
dviggiano
closed
1 year ago
0
Fix subsystem validation and implement hashing for ImplicitTPM
#103
dviggiano
closed
1 year ago
0
node.py: Avoid circular import
#102
dviggiano
closed
1 year ago
0
generate_nodes(): Handle Implicit network TPMs
#101
dviggiano
closed
1 year ago
0
Do not use `tpm.tpm`
#100
dviggiano
closed
1 year ago
0
Use `hasattr` instead of try-catch
#99
dviggiano
closed
1 year ago
0
Add state_space to node construction in tests
#98
dviggiano
closed
1 year ago
0
Add state space reroute
#97
dviggiano
closed
1 year ago
0
Add equals method to ImplicitTPM
#96
dviggiano
closed
1 year ago
0
test_network: Add test_init_with_explicit_tpm()
#95
dviggiano
closed
1 year ago
0
Network.__repr__(): Only use dict for state_space
#94
dviggiano
closed
1 year ago
0
test_build_cm(): Combine into one test
#93
dviggiano
closed
1 year ago
0
test_build_cm_explicit_tpm(): Use np.ones()
#92
dviggiano
closed
1 year ago
0
test_network.test_build_cm_explicit_tpm(); Allow for DictCache reconstruction with __repr__()
#91
dviggiano
closed
1 year ago
0
Create new test in test_network: test_build_cm_implicit_tpm()
#90
dviggiano
closed
1 year ago
0
Network._build_cm(): Account for Iterable TPM argument
#89
dviggiano
closed
1 year ago
0
Feature/tpm class
#88
dviggiano
closed
1 year ago
0
Feature/tpm class
#87
dviggiano
closed
1 year ago
0
Update tests: test_config_validation() and test_repertoire_shape()
#86
dviggiano
closed
1 year ago
0
Utilize new OrderableByPhi mixin, and edit several models to only compare to others by phi values
#85
dviggiano
closed
1 year ago
0
Only order RIA by Phi
#84
dviggiano
closed
1 year ago
0
Refactor models and tests, specifically RIA
#83
dviggiano
closed
1 year ago
0
test_metrics()
#82
dviggiano
closed
1 year ago
1
_validate_probabilities(): Allow rtol of 1e-15
#81
dviggiano
closed
1 year ago
0
subsystem: Throw error if nodes don't match cut
#80
dviggiano
closed
1 year ago
0
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