wuaipinglab / ImmuCC

Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.
http://218.4.234.74:3200/immune/
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deconvolution gene-expression immunoinformatics signature-genes

Description for each files.

1.ImmuCellDB

The scripts used to preprocess the microarray data.


2.tissue_immucc

Tissue specific signature matrix developed for tissue_ImmuCC.

3.webserver

The scripts use to preprocess RNA-Seq data and the signature matrix usedd in seq_ImmuCC model.

4.Microarray_Deconvolution.R

The scripts used for array_ImmuCC.

5.flow_cytometry.csv

The flow cytometry data used in array_ImmuCC and seq_ImmuCC.