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xing-lab-pitt
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livecellx
GNU General Public License v3.0
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build(deps): bump napari[all] from 0.4.18 to 0.5.3
#95
dependabot[bot]
opened
1 week ago
0
build(deps): bump napari[all] from 0.4.18 to 0.5.2
#94
dependabot[bot]
closed
1 week ago
1
[UI] LivecellX is currently not compatible with Napari >= 0.5.0
#93
dummyindex
opened
3 weeks ago
0
build(deps): bump pytorch-lightning from 2.1.0 to 2.4.0
#92
dependabot[bot]
opened
1 month ago
0
build(deps): bump torchmetrics from 0.8.2 to 1.4.1
#91
dependabot[bot]
opened
1 month ago
0
Optimizing the process of generating single-cell contour masks
#90
dummyindex
opened
1 month ago
1
build(deps): bump pytorch-lightning from 2.1.0 to 2.3.3
#89
dependabot[bot]
closed
1 month ago
1
[Napari UI] create interface: NoneType is not iterable
#88
dummyindex
opened
2 months ago
0
build(deps): bump pytorch-lightning from 2.1.0 to 2.3.2
#87
dependabot[bot]
closed
2 months ago
1
build(deps): bump pytorch-lightning from 2.1.0 to 2.3.1
#86
dependabot[bot]
closed
2 months ago
1
build(deps): bump torchmetrics from 0.8.2 to 1.4.0.post0
#85
dependabot[bot]
closed
1 month ago
1
[Napari UI] support time is not 0-based index (starting from zero)
#84
dummyindex
opened
2 months ago
1
[Napari UI update] Allowing users to connect the trajectories with overlap timespan and without time point overlap
#83
dummyindex
opened
3 months ago
0
[SC i/o] when saving SCTC, automatically filter sctc empty trajectoryes and empty single cells with empty contours.
#82
dummyindex
closed
3 months ago
1
SCT length == 0 case: fail to start napari; fail to print sctc; because of lack of timeframe set in SCT
#81
dummyindex
opened
3 months ago
0
UI: show mother daughter IDs in cells
#80
dummyindex
opened
4 months ago
0
UI: connect/disconnect and load -> mother/daughter cell info not updated
#79
dummyindex
opened
4 months ago
0
SctOperator: daughter/mother relation after connecting/disconnecting
#78
dummyindex
opened
9 months ago
0
add tests for edit_selected_sc&edit_sc and update save_annotations
#77
MandyZhou807
opened
10 months ago
0
Kernal crashed after running napari(sct_opeartor) on Ubuntu 20.04.6 LTS.
#76
yuyoko
opened
10 months ago
0
SctOperator: after adding a new single cell, napari Shapes cannot load text's track_id
#75
dummyindex
opened
10 months ago
1
build(deps): bump pytorch-lightning from 1.5.6 to 2.1.0
#74
dependabot[bot]
closed
2 months ago
0
Parallelize bug: multiprocessing issue on Windows/Mac; Ubuntu works fine
#73
dummyindex
opened
11 months ago
0
build(deps): bump pytorch-lightning from 1.5.6 to 2.0.9.post0
#72
dependabot[bot]
closed
11 months ago
1
Docs update: improve tutorial_general_usage and various aspects
#71
MandyZhou807
closed
11 months ago
0
labelme2coco bug and unnitest
#70
dummyindex
opened
11 months ago
0
sort out the tutorials
#69
MandyZhou807
closed
11 months ago
0
build(deps): bump torchmetrics from 0.8.2 to 1.2.0
#68
dependabot[bot]
closed
2 months ago
1
build(deps): bump pytorch-lightning from 1.5.6 to 2.0.9
#67
dependabot[bot]
closed
11 months ago
1
VisPy triangulation in older versions bug
#66
dummyindex
opened
12 months ago
1
Update: livecell_tracker->livecellx
#65
dummyindex
closed
1 year ago
0
Bump torchmetrics from 0.8.2 to 1.1.2
#64
dependabot[bot]
closed
11 months ago
1
py3.8 support issues
#63
dummyindex
opened
1 year ago
0
Add Sc Sct Displayer
#62
MandyZhou807
closed
1 year ago
0
fix keyError in delete_selected_sct
#61
MandyZhou807
closed
1 year ago
0
Bump torchmetrics from 0.8.2 to 1.1.1
#60
dependabot[bot]
closed
1 year ago
1
Bump pytorch-lightning from 1.5.6 to 2.0.8
#59
dependabot[bot]
closed
12 months ago
1
Show sc/sct/sctc attribute in Displayer and Sct_Operator tests
#58
MandyZhou807
closed
10 months ago
0
SctOperator: selected_scs
#57
dummyindex
opened
1 year ago
0
Bump numpy from 1.24.4 to 1.25.2
#56
dependabot[bot]
closed
1 year ago
1
Bump torchmetrics from 0.8.2 to 1.1.0
#55
dependabot[bot]
closed
1 year ago
1
Bump pytorch-lightning from 1.5.6 to 2.0.7
#54
dependabot[bot]
closed
1 year ago
1
Mitosis detection data prep: float infinity bug
#53
dummyindex
opened
1 year ago
1
SctOperator: save annotation outputs should not contain SingleImageDataset datasets
#52
dummyindex
opened
1 year ago
0
Yk branch2
#51
yajushikhurana
opened
1 year ago
0
SctOperator: add new single cell
#50
dummyindex
opened
1 year ago
0
SctOperator: deletion + restore operation
#49
dummyindex
opened
1 year ago
0
Bump torchmetrics from 0.8.2 to 1.0.3
#48
dependabot[bot]
closed
1 year ago
1
Check: CI failure caused by an OpenCV bug mentioned in open-cv repo
#47
dummyindex
opened
1 year ago
0
Fix bug: napari add_shapes complain when the input shapes is an empty array
#46
dummyindex
opened
1 year ago
0
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