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yeatmanlab
/
pyAFQ
Automated Fiber Quantification ... in Python
http://yeatmanlab.github.io/pyAFQ/
BSD 2-Clause "Simplified" License
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Fix gpu tracking
#1115
36000
closed
6 months ago
0
HTML tract colors got scrambled with renaming of tracts?
#1114
arokem
closed
6 months ago
1
[DOC] try to reproduce and fix nightly test
#1113
36000
closed
7 months ago
1
[WIP, ENH] begin integrating fastsurfer
#1112
36000
opened
7 months ago
0
[FIX] Set parc/vof cleaning params to default
#1111
36000
closed
7 months ago
2
Save Bundle info to individual bundles' JSON file
#1110
36000
closed
6 months ago
0
Move s3 BIDS to separate repo
#1109
36000
closed
7 months ago
1
[DOC] make altair example
#1108
36000
closed
7 months ago
1
Add conversion dictionary for old acronyms
#1107
36000
closed
5 months ago
1
Revert #1086?
#1106
arokem
opened
8 months ago
7
[ENH] allow random seeds in gpu tracking
#1105
36000
closed
7 months ago
1
[FIX] force upgraded joblib
#1104
36000
closed
8 months ago
0
[ENH/FIX] Smarter file finding
#1103
36000
closed
8 months ago
2
Upgrade python versions supported, and drop 3.8.
#1102
arokem
closed
8 months ago
1
Make the altair code a little more flexible
#1101
36000
closed
8 months ago
1
[ENH] Make the cleaning easier to interact with
#1100
36000
closed
8 months ago
0
[ENH] Order all bundles according to LPI+
#1099
36000
closed
8 months ago
2
Paths should be relative
#1098
36000
closed
6 months ago
0
[ENH] add anisotropic kurtosis, make dki default?
#1097
36000
closed
8 months ago
2
[ENH] Seeding on the white matter-gray mattter interface
#1096
36000
opened
8 months ago
2
[FIX] update this nightly test
#1095
36000
closed
8 months ago
0
[ENH] Some segmentation speed-ups
#1094
36000
closed
8 months ago
2
Reorder non-callosal ROIs
#1093
arokem
closed
8 months ago
0
Reorder callosal ROIs
#1092
arokem
closed
8 months ago
0
[FIX] Fix GPU Tractography
#1091
36000
closed
8 months ago
7
Link from website documentation to the release notes on GitHub
#1090
arokem
opened
8 months ago
0
Use only the lowest shell in calculation of the CSD response function.
#1089
arokem
closed
8 months ago
1
[FIX] correct typo in baby bundle dict OR
#1088
36000
closed
8 months ago
2
[ENH] simplify verbose tracking
#1087
36000
closed
8 months ago
1
[ENH] Begin removing confusing abbreviations
#1086
36000
closed
8 months ago
5
A couple of small doc fixes
#1085
arokem
closed
9 months ago
1
[ENH] more little tweaks to the AFQ viz utils panelfigure class
#1084
36000
closed
8 months ago
3
DOC: Small fixes to the visualization example.
#1083
arokem
closed
9 months ago
1
Remove pyafq_cli.json
#1082
arokem
closed
8 months ago
1
Interactions with QSIrecon output and BIDS specification
#1081
dkp
opened
9 months ago
9
Update fury
#1080
36000
closed
9 months ago
1
Possible upgrade to fury 0.9.0 in future release?
#1079
chiuhoward
closed
9 months ago
1
[WIP/ENH] add AR from endpoint ROIs
#1078
36000
closed
9 months ago
2
Typos in Visualizing AFQ derivatives tutorial
#1077
chiuhoward
closed
9 months ago
0
Update grant funding
#1076
arokem
closed
9 months ago
3
Using the default bundle definition raises warnings
#1075
arokem
opened
9 months ago
3
[FIX] Add exclusion ROI to IFOF
#1074
36000
closed
9 months ago
4
Adds an example to plot stages of tractometry.
#1073
arokem
closed
6 months ago
14
Changed order of probability map
#1072
zikaste
closed
9 months ago
0
[FIX] possible fix to pediatric bundle dict; some convenience updates in babyafq example
#1071
36000
closed
10 months ago
3
fixed bundle prob map order
#1070
zikaste
closed
10 months ago
4
[FIX] Fix GPU Tractography
#1069
36000
closed
8 months ago
2
[WIP, FIX] fix bug in gpu tractography
#1068
36000
closed
10 months ago
3
[FIX] More correct way of calculating mahal distances for cleaning
#1067
36000
closed
10 months ago
3
Mahalanobis diatance error
#1066
ZhengRuixi
closed
9 months ago
7
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