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dr-disco
:mask::loudspeaker: Dr. Disco: detecting genomic breakpoints of fusion transcripts in random hexamer RNA-seq data
GNU General Public License v3.0
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Extract from within bam
#131
yhoogstrate
opened
1 year ago
0
v0.18.3.: Dealing incorrect hi tags
#130
yhoogstrate
closed
1 year ago
0
`dr-disco integrate` reads GTF file twice
#129
yhoogstrate
opened
2 years ago
0
Update to changelog readme and adds strict mode to bam-extract
#128
yhoogstrate
closed
2 years ago
0
Improved logic skips sorting
#127
yhoogstrate
closed
2 years ago
0
corner case hotfix
#126
yhoogstrate
closed
3 years ago
0
Sa fix 2 7
#125
yhoogstrate
opened
3 years ago
0
V0180
#124
yhoogstrate
closed
4 years ago
0
rename 'linear' / 'circuar' to 'head-to-tail' and 'FALSE'
#123
yhoogstrate
opened
6 years ago
0
SA:Z:-tag fixes
#122
yhoogstrate
closed
6 years ago
0
Is blacklisted
#121
yhoogstrate
closed
6 years ago
0
IGV + fixed bam = missing hoverbox
#120
yhoogstrate
closed
6 years ago
1
Morefix
#119
yhoogstrate
closed
6 years ago
0
Adding more of such exceptions
#118
yhoogstrate
closed
6 years ago
0
throw error
#117
yhoogstrate
closed
6 years ago
0
mistake
#116
yhoogstrate
closed
6 years ago
0
Updates classification
#115
yhoogstrate
closed
6 years ago
0
Test PCR duplicate removal prior to running dr-disco
#114
yhoogstrate
closed
4 years ago
1
blacklist more regions
#113
yhoogstrate
closed
6 years ago
0
Blacklist glio
#112
yhoogstrate
closed
6 years ago
0
update
#111
yhoogstrate
closed
6 years ago
0
Exonic intronic integrate
#110
yhoogstrate
closed
6 years ago
0
adding options specifically for FFPE data
#109
yhoogstrate
closed
6 years ago
0
Mutations/alignment score filter and FFPE data
#108
yhoogstrate
closed
6 years ago
1
Adds new type of filter that reduces FP ratio
#107
yhoogstrate
closed
6 years ago
0
`dr-disco integrate` reorder may result in non-unique order if similar scores are reached
#106
yhoogstrate
closed
6 years ago
0
Some blacklists
#105
yhoogstrate
closed
6 years ago
1
Experimental and radical change
#104
yhoogstrate
closed
6 years ago
0
Experimental and radical change
#103
yhoogstrate
closed
6 years ago
0
Entropy filter saturation fix
#102
yhoogstrate
closed
6 years ago
0
updates an rounding error
#101
yhoogstrate
closed
6 years ago
0
more bb changes
#100
yhoogstrate
closed
6 years ago
0
gzip
#99
yhoogstrate
closed
6 years ago
0
more regions
#98
yhoogstrate
closed
6 years ago
0
more inter-chromosomal junciton
#97
yhoogstrate
closed
6 years ago
0
two highly error prone junctions in glio
#96
yhoogstrate
closed
6 years ago
0
few blacklist entries
#95
yhoogstrate
closed
6 years ago
0
better blacklist
#94
yhoogstrate
closed
6 years ago
0
fixes weird error that should actually never happen
#93
yhoogstrate
closed
6 years ago
0
oops
#92
yhoogstrate
closed
7 years ago
0
Chim overhang
#91
yhoogstrate
closed
7 years ago
0
Bbregions
#90
yhoogstrate
closed
7 years ago
0
add chim overhang balance to output
#89
yhoogstrate
closed
7 years ago
0
Small changes
#88
yhoogstrate
closed
7 years ago
0
small fp
#87
yhoogstrate
closed
7 years ago
0
more known fp
#86
yhoogstrate
closed
7 years ago
0
typo
#85
yhoogstrate
closed
7 years ago
0
Rewrite as api code
#84
yhoogstrate
closed
7 years ago
0
Intronic exonic classificaiton
#83
yhoogstrate
closed
7 years ago
2
exonic misclassified as intronic
#82
yhoogstrate
closed
7 years ago
1
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