yzx9 / swcgeom

Neuron geometry library for swc format.
Apache License 2.0
6 stars 3 forks source link
neuroanatomy neuron neuron-morphology neuroscience python

SWCGEOM

Run tests Release to GitHub Release to PyPI

A neuron geometry library for swc format.

Usage

See examples for details.

Development

# clone repo
git clone git@github.com:yzx9/swcgeom.git
cd swcgeom

# install dependencies
python -m pip install --upgrade pip
pip install build

# install editable version
pip install --editable .

Static analysis don't support import hook used in editable install for PEP660 since upgrade to setuptools v64+, detail infomation at setuptools#3518, a workaround for vscode with pylance:

{
    "python.analysis.extraPaths": ["/path/to/this/project"]
}

LICENSE

This work is licensed under a Apache-2.0.

Copyright (c) 2022-present, Zexin Yuan