issues
search
zktuong
/
ktplotspy
Python library for plotting Cellphonedb results. Ported from ktplots R package.
https://ktplotspy.readthedocs.io/
MIT License
41
stars
11
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Propose to use Marsilea for visualization
#74
Mr-Milk
opened
1 week ago
2
Difficulty: “key_error” in dot plot for CellphoneDB output
#73
ums2026
opened
2 weeks ago
5
Add interacting pairs option
#72
zktuong
closed
3 weeks ago
1
kpy.plot_cpdb - plot interacting pair rather than genes
#71
elise-smith
closed
3 weeks ago
7
Issue fix min p value
#70
ali-harasty
closed
4 weeks ago
2
pip prod(deps): update nbsphinx requirement from <=0.9.3 to <=0.9.4
#68
dependabot[bot]
closed
1 month ago
1
Update plot_cpdb_heatmap.py
#67
zktuong
closed
3 months ago
0
Add parameters for kpy.plot_cpdb_heatmap
#66
QqQss
closed
3 months ago
2
Default min p-value can't be scaled according to statistical test
#65
yxwucq
closed
4 weeks ago
3
potential issue with L-R with all non-significant hits appearing in plot_cpdb
#64
zktuong
opened
4 months ago
0
fix uneven columns and rows
#63
zktuong
closed
5 months ago
2
attempt to fix missing interactions 1
#62
zktuong
closed
5 months ago
1
Revert "check if incorrect dimensions and pad numbers if missing (#57)"
#61
zktuong
closed
5 months ago
1
fix swap celltype issue
#60
zktuong
closed
5 months ago
0
need to fix missing rows too
#59
zktuong
closed
5 months ago
1
Add celltypes option to heatmap
#58
zktuong
closed
5 months ago
2
check if incorrect dimensions and pad numbers if missing
#57
zktuong
closed
5 months ago
1
pip prod(deps): update seaborn requirement from ^0.12.0 to >=0.12,<0.14
#56
dependabot[bot]
closed
6 months ago
1
pip prod(deps): update pandas requirement from ^1.5.0 to >=1.5,<3.0
#55
dependabot[bot]
closed
6 months ago
1
Pin versions
#54
zktuong
closed
6 months ago
1
Importing Error: cannot import name 'multitype_sort' from 'mizani.utils'
#53
jyyyap
closed
5 months ago
1
Bump tj-actions/changed-files from 35 to 41 in /.github/workflows
#52
dependabot[bot]
closed
6 months ago
1
plot_cpdb KeyError
#51
hmassalha
closed
5 months ago
8
pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.4 to <=2.2.5
#50
dependabot[bot]
closed
6 months ago
1
pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.3 to <=2.2.4
#49
dependabot[bot]
closed
7 months ago
1
fix duplicate rownames introduced in cellphonedb v5
#48
zktuong
closed
7 months ago
2
pip prod(deps): update sphinx-rtd-theme requirement from <=1.3.0 to <=2.0.0
#47
dependabot[bot]
closed
7 months ago
0
kpy.plot_cpdb
#46
Tycooner
closed
5 months ago
1
Update README.rst
#45
zktuong
closed
8 months ago
1
pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.2 to <=2.2.3
#44
dependabot[bot]
closed
9 months ago
1
AttributeError: QuadMesh.set() got an unexpected keyword argument 'adata'
#43
lihaowhusos
closed
10 months ago
2
pip prod(deps): update nbsphinx requirement from <=0.9.2 to <=0.9.3
#42
dependabot[bot]
closed
11 months ago
0
pip prod(deps): update sphinx-rtd-theme requirement from <=1.2.2 to <=1.3.0
#41
dependabot[bot]
closed
11 months ago
0
ValueError on plot_cpdb_heatmap with degs_analysis=True
#40
elainarose97
closed
9 months ago
6
implementation of plot_cpdb3/4 using pyCirclize?
#39
zktuong
opened
11 months ago
0
Prep for v5
#38
zktuong
closed
10 months ago
3
pip prod(deps): update sphinx requirement from <7 to <8
#37
dependabot[bot]
closed
11 months ago
1
Update tests.yaml
#36
zktuong
closed
1 year ago
1
check to see if this fixes dependabot probs
#35
zktuong
closed
1 year ago
1
pip prod(deps): update nbsphinx requirement from <=0.9.1 to <=0.9.2
#34
dependabot[bot]
closed
1 year ago
2
pip prod(deps): update sphinx-rtd-theme requirement from <=1.2.0 to <=1.2.2
#33
dependabot[bot]
closed
1 year ago
2
pip prod(deps): update readthedocs-sphinx-ext requirement from <=2.2.0 to <=2.2.2
#32
dependabot[bot]
closed
1 year ago
2
pip prod(deps): update sphinx-autodoc-typehints requirement from <=1.23.0 to <=1.23.3
#31
dependabot[bot]
closed
1 year ago
5
Bugfix for significant interactions
#30
zktuong
closed
1 year ago
2
Plot using mtx format (not .h5ad)
#29
DaianeH
closed
9 months ago
1
update ci
#28
zktuong
closed
1 year ago
1
pip prod(deps): update anndata requirement from ^0.7.6 to >=0.7.6,<0.10.0
#27
dependabot[bot]
closed
1 year ago
0
Create dependabot.yml
#26
zktuong
closed
1 year ago
1
fix the output table
#25
zktuong
closed
1 year ago
2
compliance with pandas2.0
#24
zktuong
closed
1 year ago
1
Next