-
## Checklist
- [x] I've searched the project's [`issues`](https://github.com/foundation_image_biomarker/foundation-image-biomarker/issues?q=is%3Aissue).
## ❓ Question
Dear Suraj:
T…
-
**Name this catalog**
A clear and concise catalog name
Catalog of datasets(146) from Cooperative Association for Internet Data Analysis
**Describe the catalog**
A clear and concise description …
-
Hello,
I am trying to run Burden test and I'm running into the following error
`vtools associate variant aff -m "LogitRegBurden --alternative 2" -j1 --to_db logit > all.asso.res
INFO: 127 sample…
-
Given a binary trait run a chisq/fisher against (a) the genotypes or (b) the missing.
I use this as a qc step to help get rid of extreme artefacts before association testing at the gene level.
-
Hi, I was trying to run test_association analysis and I encountered following problem:
Exception: R package "mgcv" is necessary for testing feature association to the tree
Please install it and try …
-
We have methods for associating individual genetic variants and phenotypes (https://github.com/pystatgen/sgkit/pull/16, https://github.com/pystatgen/sgkit/pull/66), but inferring associations with gen…
-
Hi team,
I am trying to build a pipeline for fine-mapping with Susie. My results are sometimes off. I'll describe about my input data and what are the issues I am facing, please help me resolving t…
-
UK Biobank Pharma Proteomics Project (UKB-PPP) is described in this paper https://www.nature.com/articles/s41586-023-06592-6 . Among the analyses presented there is an association analysis between pr…
-
- [ ] https://github.com/monarch-initiative/monarch-app/issues/707
- [ ] https://github.com/monarch-initiative/monarch-app/issues/709
- [ ] https://github.com/monarch-initiative/monarch-app/issues/7…
-
Here is an interesting unexpected thing. You can find REGENIE generated extra 4 lines for chr4 (UKB imputed array), rs530960215 is the last SNPs, but I don't know why REGENIE have extra 4 line result …