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This issue is related to https://github.com/WireCell/wire-cell-toolkit/issues/322, where we convert "planeID" to "layerID" for PDHD APA1 inside OmnibusSigProc.
This trick works perfectly for the e…
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**Describe the bug**
the function read_aid_cnn is used within vpr_autoid_check where a "confidence" (i.e., roi probability score) is required. This results in error when processing autoid files witho…
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Hi! This is part of the error message I receive. Could you kindly advise me how to interpret this? Many thanks
Image Exception : #63 :: No image files match: /mounts/auto/p2108glia/VBG_output/outpu…
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⚠️ -- beware of interaction with #237
To combat the problem of proximal regional spots that should be retained being used as 2 separate ROIs rather than 1, we can merge the ROIs after the detecti…
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Should be able to select an ROI and have the histogram and color/opacity functions updated to match the distribution of data within that ROI.
Thanks to Steve Pieper for the suggestion.
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I have successfully run this script to conduct tissue segmentation on t2w fetal MRI scans but I'm not sure how to extract ROI values for each image. Is there a label file or look up table for the .nii…
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Working with @ambarb on this and was difficult to determine parameters to fit the rings and find the center on a stack of different images in a reliable and fast way.
Was suggested to use Hough Tr…
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The main user-facing functions, such as `autoROI`, should stay superficially the same. The interface should change as little as possible. But there should be the option to have different backends so d…
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### Description:
Add "auto hull contour" when labelling with label ROI tool.
Add it as a checkbox in the label ROI toolbar
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### Preliminary Checks
- [X] This issue is not a duplicate. Before opening a new issue, please search existing issues.
- [X] This issue is not a question, feature request, or anything other than a…