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@mkutmon a BridgeDb file cannot be loaded if a bracket is in the name (or one of the parent folders).
For details see [here](https://github.com/bridgedb/data/issues/33).
pathvisio.log message: '(H…
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There are quite some outdated/deprecated example mappings in the datasources.txt file.
Several issues have been filled on that matter:
- [x] bridgedb/datasources#3
- [ ] bridgedb/datasources#4
-…
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The current diagram is not immediately interpretable. It has been explained as "BridgeDb is the glue between the top and bottom part"
![bridgedb](https://user-images.githubusercontent.com/1141265/434…
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I suggest to remove the BridgeDb and Derby binaries from the repository. But I cannot test it because I cannot get the code to compile with `mvn clean install`.
egonw updated
3 months ago
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Giving this output:
```shell
$ java -DserverURL=http://fooservice.bridgedb.org -jar dist/org.bridgedb.server.jar
Starting server on port 8183
May 02, 2018 1:26:32 PM org.restlet.engine.http.Stre…
egonw updated
4 months ago
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The cmd output shows me that the GeneProtein mapping file is found, however the interaction one is not printed to cmd?
![image](https://user-images.githubusercontent.com/26277832/170011122-777b9944-7…
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A very old version of BridgeDb is currently used. Once I get things compiling, I can make the PR.
egonw updated
3 months ago
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Requirements:
* updated on DockerHub
* should include the Swagger API front end
egonw updated
6 years ago
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@tabbassidaloii and me have been checking the issues with the xref batch query.
Issue reported by @egonw:
```
https://webservice.bridgedb.org/Human/xrefs/S/O14494?dataSource=L
```
this seems t…
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To make the webservice easier to use, let's look into supporting aliases for `systemCode` for the webservice. This can be broken into two parts:
1. [ ] support conventionalName (e.g., `Entrez Gene`…