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I'm struggling to install deepbgc for at least a week
but...i really need this
I am so fucked up and now I'm afraid to talk to my professor
plz save me, tks
FYI: I'm not good at coding, and neith…
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Hi, I'm getting a 404 on: https://nbviewer.jupyter.org/github/Merck/deepbgc/releases/download/v0.1.0/DeepBGC_Example_Result.ipynb
The URL is accessible: https://github.com/Merck/deepbgc/releases/do…
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Anacaonda3
Python 3.7
Windows 10
In the process of installing deepBGC get an error message that the package can't be installed because hmmer and Prodigal are not accessible. Any clarificatio…
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I am trying to install deepBGC on my pc but I'm havig some issues that I cannot solve.
I am using Python3.7.0 and conda and already added all the necessary channels. However, everytime I try to ins…
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### Description of feature
Adapt deepBGC to use GPU, at the moment it uses CPU and for large input datasets takes ages to run.
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Hi, I hope you are doing well
I am so interested to use deepbgc in my work, I think I could get interesting results using it. I have been trying to install deepbgc using conda, but always get the …
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Dear users, I wonder if I can use deepBGC with metagenomic samples? In the paper describing the software it is mentioned as a useful tool for this kind of data but I don't know if it is implemented in…
drelo updated
3 years ago
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Hi,
When I tried to use DeepBGC to analyze a genbank file downloaded from NCBI, I encountered an errror like this:
Using TensorFlow backend.
WARNING 11/02 15:54:49 From /opt/anaconda3/envs/de…
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hello
i faced a problem during detector o my sample
here is the error message, it says i didn't use a negative dataset but actually i used one that is called GeneSwap_Negatives.pfam.tsv
i think…
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Hi, Prihoda:
Here, I have some problems want to consult you. I try to train DeepBGC from scratch. According to the "Readme.md" file, I download the MIBiG.pfam.tsv and GeneSwap_Negatives.pfam.tsv…