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Hi, How can I extract the dendrogram from the plotMetrics function result? Thanks
gevro updated
1 month ago
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Helloc @vtraag,
Leiden seems to be built like Louvain, in the sense that in the process of finding the best partition the nodes within a community are merged into a metanode, before performing agai…
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Based on the current clustering algorithm used, contributors can add this functionality. You can look into dendrograms [here](https://www.displayr.com/what-is-dendrogram/). This is a very easy issue t…
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I'm currently going through you tutorial https://aerickso.github.io/SpatialInferCNV/
I am having a problem with reaching this file siCNV_GeneOrderFile.tsv from your link. I created my own .gtf file…
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See:
https://stackoverflow.com/questions/78136216/strange-behaviour-with-rect-dendrogram-in-dendextend-package
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I'd love to see heatmaps support Clustering.jl's Hierarchical Clustering, sort of something like R's own `heatmap.2` (https://www.rdocumentation.org/packages/gplots/versions/3.0.1.1/topics/heatmap.2) …
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### Please make sure these conditions are met
- [X] I have checked that this issue has not already been reported.
- [X] I have confirmed this bug exists on the latest version of scanpy.
- [ ] (op…
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I'm compiling a list of several error corrections and requests for mapping algorithms into a single issue. These are sorted from hardest/lowest priority (# 1) to easiest/highest priority (# 3), altho…
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Dear Colleagues,
we are very exited using your library in our projects and thank you for developing it. Our team is quite eager to know whether you have plans to add a dendrogram and heatmap with d…
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Hello,
I would like to know if this code keeps structures between iterations to build a dendrogram after executing Leiden or Louvain.
If so, can you pinpoint it? I would be more than happy to ad…