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I am not a programmer so have been tryin to step through the instructions.
Ive installed miniconda
Got this running.
Installed Navigate.
Using C:\users\lighsheet folder
Downloaded (is this th…
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When defining the parameters with @RomainGuiet for a theoretical LISH PSF, we can decide on the lightheet illumination direction, for example here as `From bottom`
![image](https://github.com/user-…
lacan updated
2 months ago
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Hi Eric,
I manage to established the pipeline using flowdec to deconvolved the lighthsheet images, but I am observing that for each channel and block the tensorflow enviorment is reload. Is there …
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Requested at ELMI 2018
Don't forget lightsheet microscopes.
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Hi ,
I just checked out the latest https://deploy-preview-53--ngff-challenge.netlify.app/
and realized the [NGFF-validator](https://deploy-preview-36--ome-ngff-validator.netlify.app/?source=https:…
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Hi,
I realised a pretty significant bug in the Zeiss Lightsheet CZI reader. It does read the sizes of the individual stacks wrongly (assumes the biggest stack size for all of them), which is a huge p…
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Broken link at the README file here: https://github.com/openUC2/UC2-GIT/tree/master/WORKSHOP/LIGHTSHEET
![image](https://user-images.githubusercontent.com/3259326/208492991-118ab82f-4d74-462e-9b07-…
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To support lightsheet, it's helpful to control exposure time and slit width live.
For the orca fusion this is
- [x] acquire-project/cpx#42
- [x] acquire-project/cpx#43
- [x] acquire-project/cpx#…
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Capturing new "Contributor" field on staging (for lightsheet data submission).
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Hi,
I realised a pretty significant bug in the Zeiss Lightsheet CZI reader. It does read the sizes of the individual stacks wrongly (assumes the biggest stack size for all of them), which is a huge p…