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Berkeley schema now supports multiple sequencing runs via parthood on DataGeneration records. ETL code which generates records for subclasses of DataGeneration need to be updated to model this.
Exa…
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Hi,
I'm attempting to generate synthetic LC-MS/MS data from complex communities of bacteria. I tried a community of 40 different bacterial species using Prosit (Oktoberfest) and Synthedia, but the …
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One of the changes in modeling in berkeley was to support projects that were had multiple instrument runs (of the same type) which should be analyzed together. Records are linked with part_of, for the…
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Hello,
Kind of a weird 'issue' as it's more a 'forum like' topic.
I am completely new to JSDMs and have some questions about some thoughts I had about how to use them.
For instance :
- How i…
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- title: '16S: A comprehensive dataset on spatiotemporal variation of microbial plankton
communities in the Baltic Sea'
- GBIF: https://www.gbif.org/dataset/4e15ad17-be62-4101-8cc2-9f315e27f1dc
- …
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- title: '18S: A comprehensive dataset on spatiotemporal variation of microbial plankton
communities in the Baltic Sea'
- GBIF: https://www.gbif.org/dataset/6bce37d6-a682-4cca-89c4-7464cefa65e9
- …
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**Submitting author:** @wsmets (Wenke Smets)
**Repository:** https://github.com/LebeerLab/tidytacos
**Branch with paper.md** (empty if default branch): master
**Version:** v0.3.0
**Editor:** @diazrena…
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Catalog of climate-microbiome relationships
We will build a Linked Data component within the NMDC Data Portal for exploration of mechanistic microbiome processes underlying environmental processes,…
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Catalog of climate-microbiome relationships
We will build a Linked Data component within the NMDC Data Portal for exploration of mechanistic
microbiome processes underlying environmental processes, in…
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@mslarae13 and I met with James today to review his data in the portal.
1. Sample names that are longer and contain a "T" such as: _Groundwater microbial communities from the Columbia River, Washin…