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We decided to store volumetric data in the NIfTI1 format, because the volumes can store spatial orientation data (as a transform), and be loaded natively into slicer. I'm not quite sure how to impleme…
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I load the nifti-1 file using nifti-reader-js and get the header of the nifti. Now i am trying to change the orientation of the image like RAS to LAS or LPS and show it to canvas. How to do it after r…
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It would be useful for validation purposes to have a NIfTI-1 example file. This will help tools attempting to read files distinguish the failure cases of misparsing the extension or misparsing the NIf…
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I have a pipeline which works a little like:
1. convert dicom--> nifti (this was done a while ago using a different library)
2. do some processing and create synthetic CTs
3. convert nifti --…
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## Description
Hi Niivue team, thanks for your work on this package.
When using the code below for a ~10 MB NIfTI-GZ file, the image loads successfully. For a larger NIfTI-GZ file (~200 MB), I …
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From Reviewing #2979, but listing separately as it's not critical there.
- For Eigen, ideally do a search across different zip / tarball extensions, so that it works regardless of which may have …
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Both converters `habs2bids` and `nifd2bids` have their own implementation of `install_nifti`:
https://github.com/aramis-lab/clinica/blob/83d6d9958b3b3e2ffe82e5fedf09cd70b3109a44/clinica/iotools/con…
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https://github.com/rii-mango/NIFTI-Reader-JS/blob/0e406b03775d5687911f9440dffa65d7b0886137/src/nifti.ts#L143-L145
It's not ideal to have `console.error` obligatorily called by a library, as it poll…
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Hi,
I have run the total segmentator tool by giving a dicom series as an input and since the output is in ".nii.gz" format, is there any way to implicitly convert the result file back to DICOM form…
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Hello, thank you for your contribution. I encountered two issues during the model training process.
Firstly, in my initial training, I aimed to detect cancerous lesions in the prostate. The input i…