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**Background**
On the date of model input data processing, we want to save some metadata about the current nextclade SARS-COV-2 dataset (i.e., the most current dataset listed when running `nextclade …
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Dear nextstrain team,
First, thank you for your work!
We recently updatated our nextclade sars-cov-2 classic dataset (from 2024-06-13T23:42:47Z to 2024-07-17T12:57:03Z).
however, our last seque…
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I've been playing around with GARD and ran it on 10 and 20 randomly sampled Pango sequence founders.
When I tried it out on 27 sequences, however, I got an error:
```
hyphy gard --alignment sa…
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**Problem statement**
We received an updated LIVD to the Reportstream inbox. The LIVD table needs to be uploaded into ReportStream.
**What you need to know**
[LIVD-SARS-CoV-2-2024-08-29 PRIME.xlsx](h…
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https://grlc.io/api-git/egonw/SARS-CoV-2-Queries/subdir/grlc API is not working https://github.com/egonw/SARS-CoV-2-Queries/tree/master/grlc
Reported by @egonw
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## Problem statement
" AK received 2 recent messages through their feed that caused a failure in the system. We have the message ID’s as well as the accession and the issue that was encountered with …
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Add link of protocols.io for crystallization of SARS-CoV-Mpro in the last TEP.
https://www.protocols.io/view/crystallization-of-sars-cov-2-mpro-kqdg326y7v25/v1
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We should this link to the protein production of SARS-CoV-2 Mpro TEP section
https://www.protocols.io/view/sars-cov-2-mpro-small-scale-expression-and-purifi-rm7vzj8p8lx1/v1
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Dear @joicy,
Could I know where to find `https://github.com/joicy/SARS-Cov-2-Africa-dashboard` repository?
Thanks.
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From branch 7 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1771
LB.1.7+C22096T+S:R190S
Query: G22132T, C4784T,del21653,C22096T
No. of seqs: 11 (USA)
First: EPI_ISL_19177717, …