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Hi,
I tried to run the program on my data which is snps from stacks pipeline but failed. So I used test data and have the same error. The whole execution is below
```
structure_threader run -i Smal…
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Ian has some sequences that he's aligning with MSGA. MSGA crashes on them when the MEM threader is on, but it runs through when the MEM threader is off. However, when the sequences have repetitive ele…
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I had trouble in the using of fastSTRUCTURE. The dependence of Numpy, Scipy, and Cython were installed by pip of conda. GSL-2.3 were also installed successful, and the library was added to bash_…
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It would be beneficial to have a generic importer (or at least approximates to generic ) that can parse and import arbitary dump in any format.
mlr0p updated
4 years ago
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I am having trouble installing fastStructure (cloned today) on a MacOS (Ventura 13.5). I've followed all instructions from the README, and have installed all necessary dependencies. I can give details…
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Hi --
I'm having an issue with all of my runs (within a given K) reporting an identical likelihood value and, therefore, a standard deviation of zero. Looking into my outputs, I have a seed.txt fil…
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_EDIT: The proposal might depend on later CMAKE version?! Have to verify how 2.8 could still work in case we need to support it for some reason._
In order to support cmake on windows (and to improv…
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Hi all ! It would be cool to have thread weight support. Even more so because most commercial programs don't have it either. Most non-industrial embroidery designs are made for weight 40 and therefore…
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I've mapped a bam file to my MHC graph and used `vg call` to produce a vcf file of variants, but I'm not sure how to interpret it. Many positions have multiple entries, and some of the IDs are duplica…
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## The Problem
There seems to be no distinction between types of junctions when they are used to define a hash key.
```perl6
my %hash = %( "a"|"b" => "c" ); say %hash; #OUTPUT: «c»
```
…