-
@pascaleproulx
I have a working GoLLM task for AMR enrichment. We need to integrate it with the rest of the task runner architecture @kbirk. Example outputs below.
BIOMD0000000024
```
{…
-
### Please link to the GitHub Discussion for this proposed analysis.
https://github.com/AlexsLemonade/OpenScPCA-analysis/discussions/583
### Describe the goals of this analysis module.
This analysi…
-
Hello!
I am running numbat on 36 lung tumor cryo visium reactions. My normal reference is a at tumor-adjacent "normal" visium reaction that has been confirmed to be tumor-free by a pathologist. My…
-
Greetings,
I have a paired somatic pipeline and two of the callers it uses are vardict and varscan2, which will output germline calls as well. I wanted to include them into my VLR candidates beca…
-
### If you are filing this issue based on a specific GitHub Discussion, please link to the relevant Discussion.
#292
### Describe the goals of the changes to the analysis module.
Now that we have …
-
Hy,
can we output the final theta for the cell state?
If not, is it better to use first theta for the cell state or run the Bayesprism again with cell state as cell type?
Best ragards.
Roy
-
Add 7316-1106 and 7316-3000 back to hope subcohort, except for proteomics. Use the attached file from Pei.
[master_11032023 (1).txt](https://github.com/user-attachments/files/15892642/master_11032023…
-
Is it possible to perform differential expression analysis for each patient and to get the output logFC for each patient
Thanks.
-
**Background**:
- Cancer Classification: Cancer manifests in various forms across different tissues and organs of the body. The classification of cancer plays a pivotal role in understanding its beh…
inodb updated
5 months ago
-
- [ ] a. Correlation of RAS pathway signature gene expression with mesenchymal exposure values of primary tumors.
- [ ] b. Correlation of JUN/FOS target gene expression mesenchymal exposure values of…