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Dear authors,
Thank you for developing the microeco package. This is amazing!
I'm encountering a problem with Venn analysis using UpSet. My dataset contains 36 groups of samples and I am trying to…
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I collected from the lab data a list of all the FGIDs that had high levels of auto antibodies. I wanted to see which autoimmune diseases they overlapped. So in CohortOperations I loaded:
1. the list…
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### Feature description
This is probably stretching the complexity of what Makie comes with OOTB, but if we can have a raincloud plot, it would be nice to have an upset plot too. These are used whe…
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# Albert Rapp - Creating upset charts with ggplot2
In this blog post, I show you how to create upset charts with ggplot2
[https://albert-rapp.de/posts/ggplot2-tips/26_upset_charts/26_upset_charts](h…
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### Background
UpSet plots are for example available via UpsetR or ComplexUpset packages in R, and are used in the A2CPS reporting app. Could this be used here too?
Example:
![example_upset_re…
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Hi! ComplexHeatmap is one of my favourites packages! Thanks so much.
I know you must be swamped but I'm really hoping one day you can allow for stacked bar plots in the upset plots, e.g. aes(fill=…
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- Match cohort returns 0 cohorts
- Loading from atlas slows down the start up, can we do something ?
- Operate cohorts: error in upset plot when only one cohort selected
- Operatr Cohorts: move 'N…
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### Description of the bug
Hello,
The workflow `NFCORE_CUTANDRUN:CUTANDRUN:PEAK_QC:PLOT_CONSENSUS_PEAKS` is run with 0 exit code, however, while the folder `${params.outdir}/04_reporting/consensus…
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something
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Had some thoughts related to the upset plot and wanted to jot them down.
### order/group by # of overlapping omic types
I saw this recently and really liked it. visually it's easier to find what y…