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Hi,
Does NCEM support 10x visium datasets ? This is a widely used platform, if NCEM support 10x visium, I think it will become more active becasue so may labs work with 10x visium. We know that there…
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It's a remarkable job you're doing. I would like to be able to analyze my 10X scRNAseq data with SPLASH. Is the run_10X pipeline available now?
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### Question
Hello thanks for this package experimenting on instrumenting some api I'm developping.
I just noticed that instrumenting endpoint with validation that validate big response in size. H…
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**Describe the bug**
I try to run the tutorial for pycistopic (using 10x brain multiome data), on a centos 9 virtual machine. In the QC step, the relevant QC files are not formed, and the downstream …
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Hi,
I have scSLAM-seq from two samples (control, treated). I have aligned the fastq file using STAR Solo and now trying to generate the CIT file from the Bam files. I will next use the CIT in GRAN…
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Since 2024. 6. 18, Keka added support lz4 compression and decompression.
after then [lz4](https://github.com/lz4/lz4/) finally supports multicore mode at version [1.10.0](https://github.com/lz4/lz4/…
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**Is your feature request related to a problem? Please describe.**
We need a go-to location for interested folks to find the [10x Projects Board](https://github.com/orgs/GSA-TTS/projects/38)
**Descri…
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I was trying to run Dropest first time for my 10X data as follow
dropest -V -F -g /lower_bay/home/bony.dekumar/refdata-cellranger-mm10-3.0.0/genes/genes.gtf -c 10x.xml possorted_genome_bam.bam
i…
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http://epigenomics.sdsc.edu:8000/nextseq/199/
QY_395 - QY_398