-
Brought to my attention by Colin Logie
**What is the SO term name and accession?**
intronic_splicing_silencer (SO:0002056)
exonic_splicing_silencer (SO:002058)
Both are children of silencer (SO:…
-
Hi,
When I run the srnadiffExp() I got warning message as below:
```
.. 1141080 elements found...
... Annotation step done.
Constructing object...
... done.
Warning message:
In rcpp_normaliz…
-
Going forward, I will add problems to this Googlesheet:
https://docs.google.com/spreadsheets/d/1AME11i0L9TtGqMINUECFKgchKfZWNdk7RvaGM6VyeBY/edit#gid=0
-
when i tried to use this maser function, am getting this prompt error
[
Error in `dplyr::filter()`:
ℹ In argument: `ID %in% res_id`.
Caused by error:
! object 'ID' not found
Backtrace:
1. m…
-
Hi Kristoffer,
I understand that each cluster generated by isONclust represents all reads that came from the same gene.
However, I was looking for a de novo tool/method that could determine wh…
-
Thank you for developing Brie. You gave multiple examples on https://brie.readthedocs.io/. All of these examples were based on mode 2 (cell features or aggregation). However, when it comes to mode 1, …
-
I got some output using this tools,but,I can not find a gene that could be found in NCBI.Why?
-
Hello, your software is doing a great job and I am very grateful for developing such a good tool. I am currently using this tool for alternative splicing analysis. I have a question about the results …
-
Hello there,
Today I started to learn how to use this great package, this is going to be very useful for at least two publications I am trying to wrap up :)
I am interested to use these schemat…
-
I tried to run McSplicer at the third step (the first and second step ran successfully) with the command:
`python3 ../python_scripts/McSplicer.py --gtf refined_anno.gtf --count_file xxx.cnt --out_di…