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I see that GO is announcing retiring of GAF v 2.1, and I think gocats is handling the 2.2 format, but it would be good to be 100% sure
https://geneontology.github.io/docs/go-annotation-file-gaf-for…
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OBI contains some infection related terms like:
infection process (http://purl.obolibrary.org/obo/OBI_1110021)
disposition to infect an organism (http://purl.obolibrary.org/obo/OBI_1110093)
It mi…
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Add GWAS catalog file to repo. Add notebook that
- matches diseases from GWAS catalog to our diseases (perhaps use fuzzywuzzy for matching, do some manual matching if needed afterward)
- matches …
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Greetings,
We have been exploring a boolean network using ATLANTIS and are wanting to better control some of the plots. Specifically, as shown in https://www.nature.com/articles/s41598-018-22031-3/…
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TODO: split this into two issues
1. policy enforcement for clinical data repository
- https://informatics.kumc.edu/work/wiki/HeronAdminDev Access Policy and Authority Flow
2. research data…
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**Submitting author:** @ypriverol (Yasset Perez-Riverol)
**Repository:** https://github.com/PRIDE-Archive/pridepy
**Branch with paper.md** (empty if default branch): master
**Version:** v0.0.4
**Edito…
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Paulo,
Now that we have our annotators working hard, it would be nice to analyze the annotation data stored in ElasticSearch. Do you have any tips?
This [ElasticSearch Tutorial](http://okfnlabs.org…
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`_kendall_p_exact` is no longer at `mstats_basic._kendall_p_exact`, at least in scipy v 1.13.0
It seems to now be at `mstats._mstats_basic._kendall_p_exact`.
We probably need an import check whe…
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[A Context-Sensitive Support System for Medical Diagnosis Discovery based on Symptom Matching.pdf](https://github.com/constructor-igor/MedicalApi/files/784471/A.Context-Sensitive.Support.System.for.Me…