-
how to completely uninstall masurca?
thank you
-
Hi All,
For a large soil metagenome project, we trial-assemble subsets to find the best strategy and settings for megahit.
We assembled 93 Mio PE reads derived from one of the soil samples (Illu…
-
Hi,
Is there support for running this tool on RNA seq datasets. I tried to run it but it failed. I guess support would require input of a gtf/gff file of intron/exon boundaries so that these will…
-
Hello and thanks for the self-contained, all-in-one super tool!
I have generated a database using `phyloFlash_makedb.pl` based on 16S sequences extracted from genomes as follows:
```
phyloFlash…
-
Hello,
I am assembling a fungal genome (about 50Mb) using Spades. I tried lots times. I met the same errors. Could you help me check what it happen? I have attached my log file and parameters file.
…
-
Hi,
would you mind improving the `Memory available for splitting buffers: 125 Gb` message in error-correction step? That is in *bytes* actually, right?
```
$ spades.py -m 3000 -t 112 ...
0…
-
Hi, I have a use case when normalization loops.
![image](https://github.com/FStarLang/FStar/assets/930510/9e5aae4c-e46f-4260-b5ca-ddd045ab0b71)
Using F* version: 2024.01.13
Sorry for the big fi…
-
Hi:
I ran MaSuRCA-3.3.4 with 3 Illumina paired-end samples successfully but fail with 4 samples. I used PSB to submit my task and failed at the first time. I thought it might be a coincidence, so I d…
-
Using image: `quay.io/biocontainers/shovill:1.1.0--0`
Run with default options
Error message:
```
[shovill] Correcting errors in spades.fasta
[shovill] Running: pilon --genome spades.fasta…
-
Dear Alekseyzimin,
Thanx a lot for producing masurca and for your continuous efforts for the comunity. :)
I used masurca for a vertebrate genome using PE (250 bp and 100bp), MP and few nanopore seq…